RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 F2P00734 622 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 ZNF865P0CJ78 1059 aaPredicted RBP14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 GRIA1P42261 906 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 PSMD8P48556 350 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 RPL14P50914 215 aaKnown RBP14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 MAP2K5Q13163 448 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 NOMO1Q15155 1222 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 GOLGA7BQ2TAP0 167 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 BROXQ5VW32 411 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 CASC4Q6P4E1 433 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 PIGZQ86VD9 579 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 SFRP1Q8N474 314 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 ASCC1Q8N9N2 400 aaKnown RBP14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 GATA5Q9BWX5 397 aaPredicted RBP14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 SEZ6LQ9BYH1 1024 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 CDK2AP1O14519 115 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 GRID2O43424 1007 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 TRIM13O60858 407 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 XYLBO75191 536 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 DDHD2O94830 711 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 LTFP02788 710 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 ATICP31939 592 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 RACK1P63244 317 aaKnown RBP14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 POLD3Q15054 466 aaPredicted RBP14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 SCYL2Q6P3W7 929 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 LAYNQ6UX15 382 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 FAM183BPQ6ZVS7 135 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 ESX1Q8N693 406 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 NAT16Q8N8M0 369 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 FIG4Q92562 907 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 PEBP4Q96S96 227 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 C9orf16Q9BUW7 83 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 MAGEE1Q9HCI5 957 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 ARMC1Q9NVT9 282 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 NADKO95544 446 aaPredicted RBP14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 PFKMP08237 780 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 HOXD8P13378 290 aaPredicted RBP14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 HDCP19113 662 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 TFEBP19484 476 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 LMO2P25791 158 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 CASP3P42574 277 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 MPP1Q00013 466 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 VAC14Q08AM6 782 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 CYBRD1Q53TN4 286 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 SCML4Q8N228 414 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 OR2T34Q8NGX1 318 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 OR2T3Q8NH03 318 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 VMP1Q96GC9 406 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 DGCR6LQ9BY27 220 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 SPAG4Q9NPE6 437 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 GPATCH2LQ9NWQ4 482 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 UGT2A1Q9Y4X1 527 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 RAD54BQ9Y620 910 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 NRCAMQ92823 1304 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 TBKBP1A7MCY6 615 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 G3V2L1 256 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 MFN2O95140 757 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 KRT8P05787 483 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 DARSP14868 501 aaKnown RBP14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 PDGFRAP16234 1089 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 ATP6V1B2P21281 511 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 RBL1P28749 1068 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 FKBP1BP68106 108 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 CRADDP78560 199 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 CDC20Q12834 499 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 CBLBQ13191 982 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 SMU1Q2TAY7 513 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 PITRM1Q5JRX3 1037 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 MORN1Q5T089 497 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 NOTUMQ6P988 496 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 SLC16A12Q6ZSM3 486 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 ZNF534Q76KX8 674 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 CLEC4CQ8WTT0 213 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 OSCP1Q8WVF1 389 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 RXFP2Q8WXD0 754 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 SGCDQ92629 289 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 FKBP10Q96AY3 582 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 COQ7Q99807 217 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 YTHDF1Q9BYJ9 559 aaKnown RBP14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 OR2B2Q9GZK3 357 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 CYP3A43Q9HB55 503 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 RAP2CQ9Y3L5 183 aa14.05□□□□□ -0.16
GTF3C1-203ENST00000562609 MYADML2A6NDP7 307 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 RRN3P2A6NIE6 340 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 MEIS3P2A8K0S8 358 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 SLC22A1O15245 554 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 PIGNO95427 931 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 SNAP29O95721 258 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 DLGAP3O95886 979 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 ITIH1P19827 911 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 LAMA2P24043 3122 aaKnown RBP14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 ADORA2BP29275 332 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 TAP1Q03518 808 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 SNX17Q15036 470 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 ATP6AP1Q15904 470 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 ELMOD2Q8IZ81 293 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 DEPDC4Q8N2C3 294 aa14.04□□□□□ -0.16
GTF3C1-203ENST00000562609 PSMA8Q8TAA3 256 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms