RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 MTM1Q13496 603 aa16.43■□□□□ 0.22
PKD1-226ENST00000562425 PDE1CQ14123 709 aaPredicted RBP16.43■□□□□ 0.22
PKD1-226ENST00000562425 DENND2CQ68D51 928 aa16.43■□□□□ 0.22
PKD1-226ENST00000562425 RAVER1Q8IY67 606 aaKnown RBP16.43■□□□□ 0.22
PKD1-226ENST00000562425 CBARPQ8N350 705 aaPredicted RBP16.43■□□□□ 0.22
PKD1-226ENST00000562425 ATL2Q8NHH9 583 aa16.43■□□□□ 0.22
PKD1-226ENST00000562425 RHBDD1Q8TEB9 315 aa16.43■□□□□ 0.22
PKD1-226ENST00000562425 TADA1Q96BN2 335 aa16.43■□□□□ 0.22
PKD1-226ENST00000562425 COQ10AQ96MF6 247 aa16.43■□□□□ 0.22
PKD1-226ENST00000562425 PPP1R2P1Q96PQ5 205 aa16.43■□□□□ 0.22
PKD1-226ENST00000562425 FCRL5Q96RD9 977 aa16.43■□□□□ 0.22
PKD1-226ENST00000562425 SRPK1Q96SB4 655 aaKnown RBP16.43■□□□□ 0.22
PKD1-226ENST00000562425 FRMD8P1Q9BZ68 369 aaPredicted RBP16.43■□□□□ 0.22
PKD1-226ENST00000562425 GPR27Q9NS67 375 aa16.43■□□□□ 0.22
PKD1-226ENST00000562425 RSPH14Q9UHP6 348 aa16.43■□□□□ 0.22
PKD1-226ENST00000562425 DMXL2Q8TDJ6 3036 aa16.43■□□□□ 0.22
PKD1-226ENST00000562425 DOCK9Q9BZ29 2069 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 C1QTNF9BB2RNN3 333 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 H3BM21 787 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 PMPCBO75439 489 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 ANXA9O76027 345 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 NDST3O95803 873 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 EPOP01588 193 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 C1QTNF9P0C862 333 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 EPHA8P29322 1005 aaPredicted RBP16.42■□□□□ 0.22
PKD1-226ENST00000562425 CD68P34810 354 aaPredicted RBP16.42■□□□□ 0.22
PKD1-226ENST00000562425 FOXC1Q12948 553 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 MPP3Q13368 585 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 PRPSAP1Q14558 356 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 INPP5AQ14642 412 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 PCSK7Q16549 785 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 QPCTQ16769 361 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 LRRC66Q68CR7 880 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 CRTC1Q6UUV9 634 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 PARGQ86W56 976 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 SLC22A18ASQ8N1D0 253 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 DEFB124Q8NES8 71 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 SPATA22Q8NHS9 363 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 CCHCR1Q8TD31 782 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 MAIP1Q8WWC4 291 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 NUS1Q96E22 293 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 LYSMD1Q96S90 227 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 CDC6Q99741 560 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 FAM118BQ9BPY3 351 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 APOOQ9BUR5 198 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 DNAJC28Q9NX36 388 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 ZMIZ1Q9ULJ6 1067 aa16.42■□□□□ 0.22
PKD1-226ENST00000562425 PDE2AO00408 941 aaPredicted RBP16.41■□□□□ 0.22
PKD1-226ENST00000562425 MT-CYBP00156 380 aaPredicted RBP16.41■□□□□ 0.22
PKD1-226ENST00000562425 PCCBP05166 539 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 LHCGRP22888 699 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 KELP23276 732 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 HNRNPKP61978 463 aaKnown RBP eCLIP16.41■□□□□ 0.224e-15■■■■□ 23.1
PKD1-226ENST00000562425 IL9RQ01113 521 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 FZD2Q14332 565 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 ANKRD20A2Q5SQ80 823 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 ANKRD20A1Q5TYW2 823 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 ANKRD20A3Q5VUR7 823 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 ESRP1Q6NXG1 681 aaKnown RBP16.41■□□□□ 0.22
PKD1-226ENST00000562425 KDELC2Q7Z4H8 507 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 HSD11B1LQ7Z5J1 315 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 TSPAN33Q86UF1 283 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 SLC13A5Q86YT5 568 aaPredicted RBP16.41■□□□□ 0.22
PKD1-226ENST00000562425 SAP25Q8TEE9 199 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 BTN2A2Q8WVV5 523 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 LRRC45Q96CN5 670 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 DTD2Q96FN9 168 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 TRIB3Q96RU7 358 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 TMEM121BQ9BXQ6 578 aaPredicted RBP16.41■□□□□ 0.22
PKD1-226ENST00000562425 TLR10Q9BXR5 811 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 GBA3Q9H227 469 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 KCNF1Q9H3M0 494 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 C10orf88Q9H8K7 445 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 UBP1Q9NZI7 540 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 AAR2Q9Y312 384 aaKnown RBP16.41■□□□□ 0.22
PKD1-226ENST00000562425 JRKLQ9Y4A0 524 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 CABIN1Q9Y6J0 2220 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 AKAP13Q12802 2813 aa16.41■□□□□ 0.22
PKD1-226ENST00000562425 ASPMQ8IZT6 3477 aa16.4■□□□□ 0.22
PKD1-226ENST00000562425 DSPP15924 2871 aaKnown RBP16.4■□□□□ 0.22
PKD1-226ENST00000562425 C1orf232A0A0U1RR37 186 aa16.4■□□□□ 0.22
PKD1-226ENST00000562425 RGSL1A5PLK6 1076 aa16.4■□□□□ 0.22
PKD1-226ENST00000562425 GOLGA8CPA6NN73 597 aa16.4■□□□□ 0.22
PKD1-226ENST00000562425 CACNB4O00305 520 aaPredicted RBP16.4■□□□□ 0.22
PKD1-226ENST00000562425 CSF2P04141 144 aa16.4■□□□□ 0.22
PKD1-226ENST00000562425 PYGLP06737 847 aa16.4■□□□□ 0.22
PKD1-226ENST00000562425 HOXC4P09017 264 aaPredicted RBP16.4■□□□□ 0.22
PKD1-226ENST00000562425 TSHRP16473 764 aa16.4■□□□□ 0.22
PKD1-226ENST00000562425 STIP1P31948 543 aaKnown RBP16.4■□□□□ 0.22
PKD1-226ENST00000562425 ETV3P41162 512 aa16.4■□□□□ 0.22
PKD1-226ENST00000562425 BLKP51451 505 aa16.4■□□□□ 0.22
PKD1-226ENST00000562425 GEMP55040 296 aa16.4■□□□□ 0.22
PKD1-226ENST00000562425 WNT3AP56704 352 aa16.4■□□□□ 0.22
PKD1-226ENST00000562425 PTSQ03393 145 aa16.4■□□□□ 0.22
PKD1-226ENST00000562425 GALNT3Q14435 633 aa16.4■□□□□ 0.22
PKD1-226ENST00000562425 SHBQ15464 509 aa16.4■□□□□ 0.22
PKD1-226ENST00000562425 HS1BP3Q53T59 392 aa16.4■□□□□ 0.22
PKD1-226ENST00000562425 PNCKQ6P2M8 343 aa16.4■□□□□ 0.22
PKD1-226ENST00000562425 MACC1Q6ZN28 852 aa16.4■□□□□ 0.22
PKD1-226ENST00000562425 Q6ZVL8 140 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms