RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 FAF2Q96CS3 445 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 NUS1Q96E22 293 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 SCRN2Q96FV2 425 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 CHP1Q99653 195 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 SEMA3CQ99985 751 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 CCDC3Q9BQI4 270 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 ZNF670Q9BS34 389 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 TMEM168Q9H0V1 697 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 DEF6Q9H4E7 631 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 WDR26Q9H7D7 661 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 FGF22Q9HCT0 170 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 ZNHIT6Q9NWK9 470 aaKnown RBP10.3□□□□□ -0.76
CLK3-205ENST00000561673 PPIL1Q9Y3C6 166 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 ADAMTS20P59510 1910 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 MYLKQ15746 1914 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 A0A1W2PNU3 283 aaPredicted RBP10.29□□□□□ -0.76
CLK3-205ENST00000561673 RRP8O43159 456 aaKnown RBP10.29□□□□□ -0.76
CLK3-205ENST00000561673 AKR1B10O60218 316 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 FZD6O60353 706 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 TCEA3O75764 348 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 FUCA1P04066 466 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 KRT7P08729 469 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 CYP2A6P11509 494 aaPredicted RBP10.29□□□□□ -0.76
CLK3-205ENST00000561673 CCNB1P14635 433 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 CTPS1P17812 591 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 KELP23276 732 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 CCNCP24863 283 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 NFKBIAP25963 317 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 MAN1A1P33908 653 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 ABCG1P45844 678 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 GABREP78334 506 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 GBE1Q04446 702 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 SLC10A2Q12908 348 aaPredicted RBP10.29□□□□□ -0.76
CLK3-205ENST00000561673 DSG2Q14126 1118 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 MESDQ14696 234 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 IFI16Q16666 785 aaKnown RBP10.29□□□□□ -0.76
CLK3-205ENST00000561673 TSR1Q2NL82 804 aaKnown RBP10.29□□□□□ -0.76
CLK3-205ENST00000561673 TIGD7Q6NT04 549 aaPredicted RBP10.29□□□□□ -0.76
CLK3-205ENST00000561673 LRRC69Q6ZNQ3 347 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 RBM44Q6ZP01 1051 aaKnown RBP10.29□□□□□ -0.76
CLK3-205ENST00000561673 Q6ZVL8 140 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 TAF8Q7Z7C8 310 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 VSTM4Q8IW00 320 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.29□□□□□ -0.76
CLK3-205ENST00000561673 RNF214Q8ND24 703 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 CCL4L1Q8NHW4 92 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 FATE1Q969F0 183 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 GRAMD1AQ96CP6 724 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 DTD2Q96FN9 168 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 ATXN7L3BQ96GX2 97 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 TSGA13Q96PP4 275 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 SMIM14Q96QK8 99 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 MCCC1Q96RQ3 725 aaPredicted RBP10.29□□□□□ -0.76
CLK3-205ENST00000561673 TEX101Q9BY14 249 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 POLR1EQ9GZS1 481 aaKnown RBP10.29□□□□□ -0.76
CLK3-205ENST00000561673 TSPY26PQ9H489 355 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 NHEJ1Q9H9Q4 299 aaPredicted RBP10.29□□□□□ -0.76
CLK3-205ENST00000561673 POLR1BQ9H9Y6 1135 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 CYP4F12Q9HCS2 524 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 ABHD10Q9NUJ1 306 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 SPTLC3Q9NUV7 552 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 RBM22Q9NW64 420 aaKnown RBP eCLIP10.29□□□□□ -0.76
CLK3-205ENST00000561673 KCTD5Q9NXV2 234 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 LCMT1Q9UIC8 334 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 RABGEF1Q9UJ41 708 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 ENTPD2Q9Y5L3 495 aa10.29□□□□□ -0.76
CLK3-205ENST00000561673 LRRK1Q38SD2 2015 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 PRSS38A1L453 326 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 PSMD11O00231 422 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 PDE2AO00408 941 aaPredicted RBP10.28□□□□□ -0.76
CLK3-205ENST00000561673 NTN3O00634 580 aaPredicted RBP10.28□□□□□ -0.76
CLK3-205ENST00000561673 DXOO77932 396 aaKnown RBP10.28□□□□□ -0.76
CLK3-205ENST00000561673 PRLP01236 227 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 CEACAM5P06731 702 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 TPM1P09493 284 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 MYCLP1P12525 358 aaPredicted RBP10.28□□□□□ -0.76
CLK3-205ENST00000561673 CES1P23141 567 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 KDELR1P24390 212 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 ARHGAP25P42331 645 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 CCL7P80098 99 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 DSC2Q02487 901 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 PTSQ03393 145 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 CCDC173Q0VFZ6 552 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 ARHGEF7Q14155 803 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 ZFYVE27Q5T4F4 411 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 ALG1LQ6GMV1 187 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 OGFOD3Q6PK18 319 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 RFLNAQ6ZTI6 216 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 USP45Q70EL2 814 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 TECPR1Q7Z6L1 1165 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 HEATR4Q86WZ0 1026 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 SFTPA2Q8IWL1 248 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 LSMEM2Q8N112 164 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 CCNYQ8ND76 341 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 FAM46DQ8NEK8 389 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 GPR156Q8NFN8 814 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 WDR48Q8TAF3 677 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 ARRDC2Q8TBH0 407 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 CCDC74AQ96AQ1 378 aa10.28□□□□□ -0.76
CLK3-205ENST00000561673 HIC2Q96JB3 615 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms