RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 SLC4A1P02730 911 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 PRKCGP05129 697 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 ALPIP09923 528 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 SRFP11831 508 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 HLA-EP13747 358 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 BRAFP15056 766 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 TIMP2P16035 220 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 ZNF30P17039 623 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 PMLP29590 882 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 NTSR1P30989 418 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 TIE1P35590 1138 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 SOX9P48436 509 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 ZNF140P52738 457 aaPredicted RBP10.31□□□□□ -0.76
USP3-219ENST00000561326 MRPS21P82921 87 aaKnown RBP10.31□□□□□ -0.76
USP3-219ENST00000561326 ELP6Q0PNE2 266 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 ENPP2Q13822 863 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 STARD3Q14849 445 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 PON2Q15165 354 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 FBXO43Q4G163 708 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 TMEM196Q5HYL7 178 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 AARS2Q5JTZ9 985 aaKnown RBP10.31□□□□□ -0.76
USP3-219ENST00000561326 MROH9Q5TGP6 573 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 EMC10Q5UCC4 262 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 EGFLAMQ63HQ2 1017 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 ZNF470Q6ECI4 717 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 ERAP2Q6P179 960 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 FBXL19Q6PCT2 694 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 AFTPHQ6ULP2 937 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 CRTC1Q6UUV9 634 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 TIFABQ6ZNK6 161 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 LYSMD3Q7Z3D4 306 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 PTAR1Q7Z6K3 402 aaPredicted RBP10.31□□□□□ -0.76
USP3-219ENST00000561326 GALNT7Q86SF2 657 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 TRABD2AQ86V40 505 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 CBARPQ8N350 705 aaPredicted RBP10.31□□□□□ -0.76
USP3-219ENST00000561326 TTC30BQ8N4P2 665 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 ZNF366Q8N895 744 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 C2CD4AQ8NCU7 369 aaPredicted RBP10.31□□□□□ -0.76
USP3-219ENST00000561326 OR13C4Q8NGS5 318 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 GPR150Q8NGU9 434 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 PIP4K2CQ8TBX8 421 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 PBXIP1Q96AQ6 731 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 DNAJC1Q96KC8 554 aaKnown RBP10.31□□□□□ -0.76
USP3-219ENST00000561326 MCCC1Q96RQ3 725 aaPredicted RBP10.31□□□□□ -0.76
USP3-219ENST00000561326 AGAP2Q99490 1192 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 RBBP8Q99708 897 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 FBRSQ9HAH7 460 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 FBRSL1Q9HCM7 1045 aaKnown RBP10.31□□□□□ -0.76
USP3-219ENST00000561326 KCNK9Q9NPC2 374 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 PRSS16Q9NQE7 514 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 SLC2A4RGQ9NR83 387 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 HEBP1Q9NRV9 189 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 CATSPERZQ9NTU4 200 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 IL1RAPL1Q9NZN1 696 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 IL17CQ9P0M4 197 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 APPL1Q9UKG1 709 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 FBXO5Q9UKT4 447 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 PPM1HQ9ULR3 514 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 SLC30A1Q9Y6M5 507 aa10.31□□□□□ -0.76
USP3-219ENST00000561326 COL4A2P08572 1712 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 CCDC162PA2VCL2 907 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 C16orf96A6NNT2 1141 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 GOLGA8TH3BQL2 631 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 H7C0S8 307 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 AURKAO14965 403 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 UGT1A9O60656 530 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 FAM155BO75949 473 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 CLDN7O95471 211 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 GOT2P00505 430 aaKnown RBP10.3□□□□□ -0.76
USP3-219ENST00000561326 IL1BP01584 269 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 AHSGP02765 367 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 ASGR2P07307 311 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 ITGA2BP08514 1039 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 KRT4P19013 534 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 OGNP20774 298 aaKnown RBP10.3□□□□□ -0.76
USP3-219ENST00000561326 ITGB7P26010 798 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 ARNTP27540 789 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 VIPR1P32241 457 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 IL12RB1P42701 662 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 KIR2DL1P43626 348 aaPredicted RBP10.3□□□□□ -0.76
USP3-219ENST00000561326 ARSDP51689 593 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 SEC13P55735 322 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 SFSWAPQ12872 951 aaKnown RBP10.3□□□□□ -0.76
USP3-219ENST00000561326 CTBP1Q13363 440 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 CAMK2GQ13555 558 aaPredicted RBP10.3□□□□□ -0.76
USP3-219ENST00000561326 SEPT7Q16181 437 aaKnown RBP10.3□□□□□ -0.76
USP3-219ENST00000561326 HSF5Q4G112 596 aaPredicted RBP10.3□□□□□ -0.76
USP3-219ENST00000561326 SLC44A4Q53GD3 710 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 LYPLAL1Q5VWZ2 237 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 NAIF1Q69YI7 327 aaPredicted RBP10.3□□□□□ -0.76
USP3-219ENST00000561326 CERS6Q6ZMG9 384 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 CILP2Q8IUL8 1156 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 SFTPA1Q8IWL2 248 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 ACMSDQ8TDX5 336 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 CABS1Q96KC9 395 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 FAM129BQ96TA1 746 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 CDH19Q9H159 772 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 RHOJQ9H4E5 214 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 MTG2Q9H4K7 406 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 UGT1A7Q9HAW7 530 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms