RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 DTD2Q96FN9 168 aa17.22■□□□□ 0.35
CDC42BPB-208ENST00000561271 MCCC1Q96RQ3 725 aaPredicted RBP17.22■□□□□ 0.35
CDC42BPB-208ENST00000561271 GULP1Q9UBP9 304 aa17.22■□□□□ 0.35
CDC42BPB-208ENST00000561271 ZNF106Q9H2Y7 1883 aaKnown RBP17.22■□□□□ 0.35
CDC42BPB-208ENST00000561271 GOLGA6CA6NDK9 693 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 GOLGA6BA6NDN3 693 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 MATN3O15232 486 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 MTA2O94776 668 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 KRT1P04264 644 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 GOLGA6DP0CG33 693 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 NFKBIAP25963 317 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 RPIAP49247 311 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 TBX2Q13207 712 aaPredicted RBP17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 ARHGEF7Q14155 803 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 ALG1LQ6GMV1 187 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 PNCKQ6P2M8 343 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 USP45Q70EL2 814 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 HEATR4Q86WZ0 1026 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 GKN2Q86XP6 184 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 RHOT2Q8IXI1 618 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 ARL10Q8N8L6 244 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 PIH1D2Q8WWB5 315 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 NAT6Q93015 286 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 HDAC11Q96DB2 347 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 TSGA13Q96PP4 275 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 RBM15Q96T37 977 aaKnown RBP eCLIP17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 SUDS3Q9H7L9 328 aaPredicted RBP17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 SYNDIG1Q9H7V2 258 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 RBM22Q9NW64 420 aaKnown RBP eCLIP17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 GOLGA6AQ9NYA3 693 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 DTLQ9NZJ0 730 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 HYOU1Q9Y4L1 999 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 DGKBQ9Y6T7 804 aa17.21■□□□□ 0.35
CDC42BPB-208ENST00000561271 LOC400499M0QZD8 3231 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 AKR1B15C9JRZ8 316 aaPredicted RBP17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 FZD6O60353 706 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 TNFP01375 233 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 MYCLP1P12525 358 aaPredicted RBP17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 TNNT1P13805 278 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 CCNB1P14635 433 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 KELP23276 732 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 CCNCP24863 283 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 TRIM23P36406 574 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 FAM182AQ5T1J6 154 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 LRRC66Q68CR7 880 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 RFLNAQ6ZTI6 216 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 Q6ZVL8 140 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 CCDC13Q8IYE1 715 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 PLD5Q8N7P1 536 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 CCNYQ8ND76 341 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 SCG3Q8WXD2 468 aaKnown RBP17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 FATE1Q969F0 183 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 SCRN2Q96FV2 425 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 ZNF830Q96NB3 372 aaPredicted RBP17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 RNF157Q96PX1 679 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 CCDC3Q9BQI4 270 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 TDRD1Q9BXT4 1180 aaKnown RBP17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 CYP4F12Q9HCS2 524 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 CD84Q9UIB8 345 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 MOSPD1Q9UJG1 213 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 PADI4Q9UM07 663 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 GPR34Q9UPC5 381 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 CHKBQ9Y259 395 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 HEY1Q9Y5J3 304 aa17.2■□□□□ 0.34
CDC42BPB-208ENST00000561271 PRSS38A1L453 326 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 C3orf70A6NLC5 250 aaPredicted RBP17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 KCNK1O00180 336 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 PSMD11O00231 422 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 USP12O75317 370 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 MPOP05164 745 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 MX2P20592 715 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 ARHGAP25P42331 645 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 EPHB1P54762 984 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 GABREP78334 506 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 NIPAL4Q0D2K0 466 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 ISXQ2M1V0 245 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 RAET1GQ6H3X3 334 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 LVRNQ6Q4G3 990 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 SARM1Q6SZW1 724 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 SFTPA2Q8IWL1 248 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 TPCN2Q8NHX9 752 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 ARRDC2Q8TBH0 407 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 CCDC74AQ96AQ1 378 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 CRELD1Q96HD1 420 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 LGMNQ99538 433 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 TRIM5Q9C035 493 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 TMEM168Q9H0V1 697 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 PHPT1Q9NRX4 125 aaPredicted RBP17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 RABGEF1Q9UJ41 708 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 BPTFQ12830 3046 aa17.19■□□□□ 0.34
CDC42BPB-208ENST00000561271 AHCTF1Q8WYP5 2266 aa17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 A0A087WV48 116 aa17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 A0A0J9YYE9 177 aa17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 CAPN8A6NHC0 703 aa17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 APOL1O14791 398 aa17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 TNFRSF10CO14798 259 aa17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 TRBC1P01850 177 aa17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 HOXC4P09017 264 aaPredicted RBP17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 CDK3Q00526 305 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms