RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 GMLQ99445 158 aa16.52■□□□□ 0.24
TPM1-228ENST00000560975 ASB7Q9H672 318 aa16.52■□□□□ 0.24
TPM1-228ENST00000560975 HMG20AQ9NP66 347 aa16.52■□□□□ 0.24
TPM1-228ENST00000560975 IGSF5Q9NSI5 407 aa16.52■□□□□ 0.24
TPM1-228ENST00000560975 RCOR3Q9P2K3 495 aaPredicted RBP16.52■□□□□ 0.24
TPM1-228ENST00000560975 SCN1AP35498 2009 aa16.52■□□□□ 0.23
TPM1-228ENST00000560975 COL11A1P12107 1806 aaPredicted RBP16.52■□□□□ 0.23
TPM1-228ENST00000560975 WNT10BO00744 389 aa16.52■□□□□ 0.23
TPM1-228ENST00000560975 DCLK1O15075 740 aa16.52■□□□□ 0.23
TPM1-228ENST00000560975 AXIN1O15169 862 aa16.52■□□□□ 0.23
TPM1-228ENST00000560975 TPD52L2O43399 206 aaKnown RBP16.52■□□□□ 0.23
TPM1-228ENST00000560975 LSM3P62310 102 aaKnown RBP16.52■□□□□ 0.23
TPM1-228ENST00000560975 BNIP2Q12982 314 aa16.52■□□□□ 0.23
TPM1-228ENST00000560975 SLC25A52Q3SY17 297 aa16.52■□□□□ 0.23
TPM1-228ENST00000560975 Q8N9G6 341 aaPredicted RBP16.52■□□□□ 0.23
TPM1-228ENST00000560975 RNF145Q96MT1 663 aa16.52■□□□□ 0.23
TPM1-228ENST00000560975 HOPXQ9BPY8 73 aaPredicted RBP16.52■□□□□ 0.23
TPM1-228ENST00000560975 ABCD2Q9UBJ2 740 aa16.52■□□□□ 0.23
TPM1-228ENST00000560975 ANAPC2Q9UJX6 822 aa16.52■□□□□ 0.23
TPM1-228ENST00000560975 NDUFAF1Q9Y375 327 aa16.52■□□□□ 0.23
TPM1-228ENST00000560975 SNX10Q9Y5X0 201 aa16.52■□□□□ 0.23
TPM1-228ENST00000560975 ABCB7O75027 752 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 ALDH4A1P30038 563 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 ADIGQ0VDE8 80 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 BST2Q10589 180 aaKnown RBP16.51■□□□□ 0.23
TPM1-228ENST00000560975 GRB7Q14451 532 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 UGP2Q16851 508 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 UGT3A2Q3SY77 523 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 OTUD1Q5VV17 481 aaPredicted RBP16.51■□□□□ 0.23
TPM1-228ENST00000560975 SYPL2Q5VXT5 272 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 IQSEC1Q6DN90 963 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 FRA10AC1Q70Z53 315 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 SLCO6A1Q86UG4 719 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 PNPT1Q8TCS8 783 aaKnown RBP16.51■□□□□ 0.23
TPM1-228ENST00000560975 LRRC58Q96CX6 371 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 CELF6Q96J87 481 aaKnown RBP16.51■□□□□ 0.23
TPM1-228ENST00000560975 CNDP2Q96KP4 475 aaKnown RBP16.51■□□□□ 0.23
TPM1-228ENST00000560975 SLC30A3Q99726 388 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 DNMT3BQ9UBC3 853 aaKnown RBP16.51■□□□□ 0.23
TPM1-228ENST00000560975 KLQ9UEF7 1012 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 A0A087WZ62 844 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 TTC24A2A3L6 582 aaPredicted RBP16.51■□□□□ 0.23
TPM1-228ENST00000560975 H0Y858 1186 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 PPP6CO00743 305 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 KPNA6O60684 536 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 MT-CYBP00156 380 aaPredicted RBP16.51■□□□□ 0.23
TPM1-228ENST00000560975 HSD17B1P14061 328 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 HTR1BP28222 390 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 GSK3BP49841 420 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 NKX2-5P52952 324 aaPredicted RBP16.51■□□□□ 0.23
TPM1-228ENST00000560975 TPD52P55327 224 aaPredicted RBP16.51■□□□□ 0.23
TPM1-228ENST00000560975 ZNF789Q5FWF6 425 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 TECRLQ5HYJ1 363 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 UTS2BQ765I0 119 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 PARP8Q8N3A8 854 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 DNERQ8NFT8 737 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 IPMKQ8NFU5 416 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 NSMCE3Q96MG7 304 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 TMEM74Q96NL1 305 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 FDXACB1Q9BRP7 624 aaPredicted RBP16.51■□□□□ 0.23
TPM1-228ENST00000560975 YTHDF1Q9BYJ9 559 aaKnown RBP16.51■□□□□ 0.23
TPM1-228ENST00000560975 TLR9Q9NR96 1032 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 MRGBPQ9NV56 204 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 HACD3Q9P035 362 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 MTRRQ9UBK8 725 aa16.51■□□□□ 0.23
TPM1-228ENST00000560975 MRPL42Q9Y6G3 142 aaKnown RBP16.51■□□□□ 0.23
TPM1-228ENST00000560975 EVPLQ92817 2033 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 H3BMM5 538 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 GPIP06744 558 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 PCNAP12004 261 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 FCGR1AP12314 374 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 LMO2P25791 158 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 BACE1P56817 501 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 CLCQ05315 142 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 RPS6KA2Q15349 733 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 FKBP1CQ5VVH2 108 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 SPARTQ8N0X7 666 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 SLC2A14Q8TDB8 520 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 AFG1LQ8WV93 481 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 VPS33AQ96AX1 596 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 KCTD14Q9BQ13 255 aaPredicted RBP16.5■□□□□ 0.23
TPM1-228ENST00000560975 KIFC1Q9BW19 673 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 NDEL1Q9GZM8 345 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 ATXN3LQ9H3M9 355 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 PIGVQ9NUD9 493 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 VWA7Q9Y334 891 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 JUNBP17275 347 aaPredicted RBP16.5■□□□□ 0.23
TPM1-228ENST00000560975 S100A1P23297 94 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 RABGGTBP53611 331 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 BCAT1P54687 386 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 TPI1P60174 286 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 CLEC4FQ8N1N0 589 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 FAM167AQ96KS9 214 aa16.5■□□□□ 0.23
TPM1-228ENST00000560975 INTS10Q9NVR2 710 aaKnown RBP16.5■□□□□ 0.23
TPM1-228ENST00000560975 IGKV6-21A0A0C4DH24 114 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 C7P10643 843 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 CPB1P15086 417 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 ARNTP27540 789 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 NDUFV1P49821 464 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 LIPEQ05469 1076 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms