RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 FHOD1Q9Y613 1164 aa18.56■□□□□ 0.56
TPM1-226ENST00000560959 IGHV1OR21-1A0A087WYE8 117 aa18.55■□□□□ 0.56
TPM1-226ENST00000560959 PPM1DO15297 605 aa18.55■□□□□ 0.56
TPM1-226ENST00000560959 FGF10O15520 208 aaPredicted RBP18.55■□□□□ 0.56
TPM1-226ENST00000560959 NKX2-8O15522 239 aa18.55■□□□□ 0.56
TPM1-226ENST00000560959 PRAMEF11O60813 436 aa18.55■□□□□ 0.56
TPM1-226ENST00000560959 CEACAM5P06731 702 aa18.55■□□□□ 0.56
TPM1-226ENST00000560959 KRT3P12035 628 aa18.55■□□□□ 0.56
TPM1-226ENST00000560959 HTR7P34969 479 aa18.55■□□□□ 0.56
TPM1-226ENST00000560959 NDST2P52849 883 aa18.55■□□□□ 0.56
TPM1-226ENST00000560959 BIRC2Q13490 618 aa18.55■□□□□ 0.56
TPM1-226ENST00000560959 VWA3BQ502W6 1294 aa18.55■□□□□ 0.56
TPM1-226ENST00000560959 NLGN4XQ8N0W4 816 aa18.55■□□□□ 0.56
TPM1-226ENST00000560959 PYROXD2Q8N2H3 581 aa18.55■□□□□ 0.56
TPM1-226ENST00000560959 BMPERQ8N8U9 685 aa18.55■□□□□ 0.56
TPM1-226ENST00000560959 NLGN4YQ8NFZ3 816 aaPredicted RBP18.55■□□□□ 0.56
TPM1-226ENST00000560959 ABHD17AQ96GS6 310 aa18.55■□□□□ 0.56
TPM1-226ENST00000560959 TEX101Q9BY14 249 aa18.55■□□□□ 0.56
TPM1-226ENST00000560959 GPN2Q9H9Y4 310 aaPredicted RBP18.55■□□□□ 0.56
TPM1-226ENST00000560959 PHPT1Q9NRX4 125 aaPredicted RBP18.55■□□□□ 0.56
TPM1-226ENST00000560959 TEX33O43247 280 aa18.54■□□□□ 0.56
TPM1-226ENST00000560959 FUCA1P04066 466 aa18.54■□□□□ 0.56
TPM1-226ENST00000560959 PRKCGP05129 697 aa18.54■□□□□ 0.56
TPM1-226ENST00000560959 UCHL3P15374 230 aa18.54■□□□□ 0.56
TPM1-226ENST00000560959 MAN1A1P33908 653 aa18.54■□□□□ 0.56
TPM1-226ENST00000560959 CDR2Q01850 454 aa18.54■□□□□ 0.56
TPM1-226ENST00000560959 BCL2L1Q07817 233 aa18.54■□□□□ 0.56
TPM1-226ENST00000560959 ABHD18Q0P651 414 aa18.54■□□□□ 0.56
TPM1-226ENST00000560959 CDC20Q12834 499 aa18.54■□□□□ 0.56
TPM1-226ENST00000560959 KLRB1Q12918 225 aa18.54■□□□□ 0.56
TPM1-226ENST00000560959 MIIPQ5JXC2 388 aa18.54■□□□□ 0.56
TPM1-226ENST00000560959 ATCAYQ86WG3 371 aa18.54■□□□□ 0.56
TPM1-226ENST00000560959 FAM114A1Q8IWE2 563 aa18.54■□□□□ 0.56
TPM1-226ENST00000560959 NAGSQ8N159 534 aa18.54■□□□□ 0.56
TPM1-226ENST00000560959 COQ10AQ96MF6 247 aa18.54■□□□□ 0.56
TPM1-226ENST00000560959 FRMD8Q9BZ67 464 aaPredicted RBP18.54■□□□□ 0.56
TPM1-226ENST00000560959 TRIT1Q9H3H1 467 aaKnown RBP18.54■□□□□ 0.56
TPM1-226ENST00000560959 LRRC4CQ9HCJ2 640 aa18.54■□□□□ 0.56
TPM1-226ENST00000560959 OCIAD1Q9NX40 245 aa18.54■□□□□ 0.56
TPM1-226ENST00000560959 KIAA1468Q9P260 1216 aa18.54■□□□□ 0.56
TPM1-226ENST00000560959 NOCTQ9UK39 431 aaKnown RBP18.54■□□□□ 0.56
TPM1-226ENST00000560959 ARHGEF17Q96PE2 2063 aaPredicted RBP18.54■□□□□ 0.56
TPM1-226ENST00000560959 ZFC3H1O60293 1989 aaKnown RBP18.53■□□□□ 0.56
TPM1-226ENST00000560959 FAM170AA1A519 330 aa18.53■□□□□ 0.56
TPM1-226ENST00000560959 EFCAB7A8K855 629 aa18.53■□□□□ 0.56
TPM1-226ENST00000560959 F8VZ95 297 aa18.53■□□□□ 0.56
TPM1-226ENST00000560959 J3KR12 359 aa18.53■□□□□ 0.56
TPM1-226ENST00000560959 TRAFD1O14545 582 aaPredicted RBP18.53■□□□□ 0.56
TPM1-226ENST00000560959 TEAD1P28347 426 aa18.53■□□□□ 0.56
TPM1-226ENST00000560959 ERCC5P28715 1186 aaPredicted RBP18.53■□□□□ 0.56
TPM1-226ENST00000560959 RFC1P35251 1148 aaPredicted RBP18.53■□□□□ 0.56
TPM1-226ENST00000560959 MC2RQ01718 297 aa18.53■□□□□ 0.56
TPM1-226ENST00000560959 SEPT6Q14141 434 aa18.53■□□□□ 0.56
TPM1-226ENST00000560959 ACOX1Q15067 660 aa18.53■□□□□ 0.56
TPM1-226ENST00000560959 LACTB2Q53H82 288 aaPredicted RBP18.53■□□□□ 0.56
TPM1-226ENST00000560959 NKAIN2Q5VXU1 208 aa18.53■□□□□ 0.56
TPM1-226ENST00000560959 TRIM72Q6ZMU5 477 aa18.53■□□□□ 0.56
TPM1-226ENST00000560959 CBARPQ8N350 705 aaPredicted RBP18.53■□□□□ 0.56
TPM1-226ENST00000560959 TSEN2Q8NCE0 465 aaKnown RBP18.53■□□□□ 0.56
TPM1-226ENST00000560959 RTP4Q96DX8 246 aa18.53■□□□□ 0.56
TPM1-226ENST00000560959 TUBGCP2Q9BSJ2 902 aa18.53■□□□□ 0.56
TPM1-226ENST00000560959 KCNK4Q9NYG8 393 aa18.53■□□□□ 0.56
TPM1-226ENST00000560959 FZD10Q9ULW2 581 aa18.53■□□□□ 0.56
TPM1-226ENST00000560959 PLAAQ9Y263 795 aa18.53■□□□□ 0.56
TPM1-226ENST00000560959 A0A1W2PQ67 120 aa18.52■□□□□ 0.56
TPM1-226ENST00000560959 BLACEA4D250 179 aa18.52■□□□□ 0.56
TPM1-226ENST00000560959 CREB3O43889 395 aa18.52■□□□□ 0.56
TPM1-226ENST00000560959 PALMO75781 387 aa18.52■□□□□ 0.56
TPM1-226ENST00000560959 IVLP07476 585 aa18.52■□□□□ 0.56
TPM1-226ENST00000560959 GPD1P21695 349 aa18.52■□□□□ 0.56
TPM1-226ENST00000560959 AK4P27144 223 aaPredicted RBP18.52■□□□□ 0.56
TPM1-226ENST00000560959 CSF2RBP32927 897 aa18.52■□□□□ 0.56
TPM1-226ENST00000560959 RGRP47804 291 aa18.52■□□□□ 0.56
TPM1-226ENST00000560959 PTP4A2Q12974 167 aa18.52■□□□□ 0.56
TPM1-226ENST00000560959 RFTN1Q14699 578 aaPredicted RBP18.52■□□□□ 0.56
TPM1-226ENST00000560959 ANKS6Q68DC2 871 aa18.52■□□□□ 0.56
TPM1-226ENST00000560959 WDR59Q6PJI9 974 aa18.52■□□□□ 0.56
TPM1-226ENST00000560959 PELI3Q8N2H9 469 aa18.52■□□□□ 0.56
TPM1-226ENST00000560959 MLKLQ8NB16 471 aa18.52■□□□□ 0.56
TPM1-226ENST00000560959 SCARF2Q96GP6 870 aaPredicted RBP18.52■□□□□ 0.56
TPM1-226ENST00000560959 C11orf70Q9BRQ4 267 aa18.52■□□□□ 0.56
TPM1-226ENST00000560959 FBXO8Q9NRD0 319 aa18.52■□□□□ 0.56
TPM1-226ENST00000560959 SUFUQ9UMX1 484 aa18.52■□□□□ 0.56
TPM1-226ENST00000560959 SLC17A4Q9Y2C5 497 aa18.52■□□□□ 0.56
TPM1-226ENST00000560959 TMEM184BQ9Y519 407 aaPredicted RBP18.52■□□□□ 0.56
TPM1-226ENST00000560959 NOTCH2Q04721 2471 aa18.52■□□□□ 0.56
TPM1-226ENST00000560959 LOC101059948A0A1B0GTJ6 334 aa18.51■□□□□ 0.55
TPM1-226ENST00000560959 ARHGAP42A6NI28 874 aa18.51■□□□□ 0.55
TPM1-226ENST00000560959 SIGLEC16A6NMB1 481 aa18.51■□□□□ 0.55
TPM1-226ENST00000560959 UNGP13051 313 aaPredicted RBP18.51■□□□□ 0.55
TPM1-226ENST00000560959 GNPDA1P46926 289 aa18.51■□□□□ 0.55
TPM1-226ENST00000560959 FASLGP48023 281 aa18.51■□□□□ 0.55
TPM1-226ENST00000560959 CTBSQ01459 385 aa18.51■□□□□ 0.55
TPM1-226ENST00000560959 FMO1Q01740 532 aa18.51■□□□□ 0.55
TPM1-226ENST00000560959 TPD52L1Q16890 204 aaPredicted RBP18.51■□□□□ 0.55
TPM1-226ENST00000560959 SLC30A9Q6PML9 568 aa18.51■□□□□ 0.55
TPM1-226ENST00000560959 WDR74Q6RFH5 385 aaPredicted RBP18.51■□□□□ 0.55
TPM1-226ENST00000560959 CEACAM20Q6UY09 585 aa18.51■□□□□ 0.55
TPM1-226ENST00000560959 ARHGAP22Q7Z5H3 698 aa18.51■□□□□ 0.55
TPM1-226ENST00000560959 HEATR4Q86WZ0 1026 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms