RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 C1orf53Q5VUE5 145 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 IRGCQ6NXR0 463 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 ZFP1Q6P2D0 407 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 CNKSR3Q6P9H4 555 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 CHSY3Q70JA7 882 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 EFL1Q7Z2Z2 1120 aaKnown RBP9.72□□□□□ -0.85
RTF1-206ENST00000560447 METTL3Q86U44 580 aaKnown RBP9.72□□□□□ -0.85
RTF1-206ENST00000560447 PGAM4Q8N0Y7 254 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 CHCHD4Q8N4Q1 142 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 KYQ8NBH2 561 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 TXNDC5Q8NBS9 432 aaKnown RBP9.72□□□□□ -0.85
RTF1-206ENST00000560447 MAPK15Q8TD08 544 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 N4BP2L2Q92802 583 aaPredicted RBP9.72□□□□□ -0.85
RTF1-206ENST00000560447 IGSF21Q96ID5 467 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 ZNF512Q96ME7 567 aaPredicted RBP9.72□□□□□ -0.85
RTF1-206ENST00000560447 OR52B2Q96RD2 323 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 OLFM1Q99784 485 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 AARSD1Q9BTE6 412 aaKnown RBP9.72□□□□□ -0.85
RTF1-206ENST00000560447 KLF16Q9BXK1 252 aaPredicted RBP9.72□□□□□ -0.85
RTF1-206ENST00000560447 ADGRE3Q9BY15 652 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 NACA2Q9H009 215 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 EFCAB1Q9HAE3 211 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 ZBTB26Q9HCK0 441 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 S100A14Q9HCY8 104 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 CDH22Q9UJ99 828 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 OGDHLQ9ULD0 1010 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.72□□□□□ -0.85
RTF1-206ENST00000560447 TET1Q8NFU7 2136 aa9.71□□□□□ -0.85
RTF1-206ENST00000560447 E2F8A0AVK6 867 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 TYW5A2RUC4 315 aaKnown RBP9.71□□□□□ -0.86
RTF1-206ENST00000560447 E9PBE3 544 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 H0Y3Z8 333 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 COCHO43405 550 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 KLHL41O60662 606 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 EFCAB14O75071 495 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 VPS4BO75351 444 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 STC2O76061 302 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 GOT2P00505 430 aaKnown RBP9.71□□□□□ -0.86
RTF1-206ENST00000560447 PYGLP06737 847 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 HMBSP08397 361 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 ANPEPP15144 967 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 PFKLP17858 780 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 SLC6A4P31645 630 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 OR1D2P34982 312 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 ALDH1A3P47895 512 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 PSMD8P48556 350 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 ACADVLP49748 655 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 KCNQ1P51787 676 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 CLCN2P51788 898 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 CLNS1AP54105 237 aaKnown RBP9.71□□□□□ -0.86
RTF1-206ENST00000560447 ADARP55265 1226 aaKnown RBP9.71□□□□□ -0.86
RTF1-206ENST00000560447 SLC25A3Q00325 362 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 DSG1Q02413 1049 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 SULT2A1Q06520 285 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 TBL3Q12788 808 aaKnown RBP9.71□□□□□ -0.86
RTF1-206ENST00000560447 STX5Q13190 355 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 BLMHQ13867 455 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 RAB33AQ14088 237 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 IKBKEQ14164 716 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 SQLEQ14534 574 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 IHHQ14623 411 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 SMAD1Q15797 465 aaKnown RBP9.71□□□□□ -0.86
RTF1-206ENST00000560447 PABPC1LQ4VXU2 614 aaKnown RBP9.71□□□□□ -0.86
RTF1-206ENST00000560447 VWA5B1Q5TIE3 1220 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 IL31Q6EBC2 164 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 PRSS55Q6UWB4 352 aaPredicted RBP9.71□□□□□ -0.86
RTF1-206ENST00000560447 HACD2Q6Y1H2 254 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 PTAR1Q7Z6K3 402 aaPredicted RBP9.71□□□□□ -0.86
RTF1-206ENST00000560447 DEFB107AQ8IZN7 70 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 PELI3Q8N2H9 469 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 STK40Q8N2I9 435 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 PHTF2Q8N3S3 785 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 NKAPQ8N5F7 415 aaKnown RBP9.71□□□□□ -0.86
RTF1-206ENST00000560447 CCNYL1Q8N7R7 359 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 HJURPQ8NCD3 748 aaPredicted RBP9.71□□□□□ -0.86
RTF1-206ENST00000560447 FBXO27Q8NI29 283 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 GPR152Q8TDT2 470 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 GIPC2Q8TF65 315 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 DLG3Q92796 817 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 TOP1MTQ969P6 601 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 CDKN2AIPNLQ96HQ2 116 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 TBATAQ96M53 351 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 CYP2S1Q96SQ9 504 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 MYCBPQ99417 103 aaPredicted RBP9.71□□□□□ -0.86
RTF1-206ENST00000560447 TDRD1Q9BXT4 1180 aaKnown RBP9.71□□□□□ -0.86
RTF1-206ENST00000560447 DERL2Q9GZP9 239 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 CCDC68Q9H2F9 335 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 PFDN4Q9NQP4 134 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 PAK6Q9NQU5 681 aaPredicted RBP9.71□□□□□ -0.86
RTF1-206ENST00000560447 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.71□□□□□ -0.86
RTF1-206ENST00000560447 TMEM45AQ9NWC5 275 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 NMRK1Q9NWW6 199 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 ZDHHC7Q9NXF8 308 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 TAS2R13Q9NYV9 303 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 ZNF510Q9Y2H8 683 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 ASB3Q9Y575 518 aa9.71□□□□□ -0.86
RTF1-206ENST00000560447 ZFP37Q9Y6Q3 630 aaPredicted RBP9.71□□□□□ -0.86
RTF1-206ENST00000560447 CCDC162PA2VCL2 907 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 LCHNA4D1U4 455 aa9.7□□□□□ -0.86
RTF1-206ENST00000560447 SYCE1LA8MT33 242 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms