RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 MACROD2A1Z1Q3 448 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 C16orf96A6NNT2 1141 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 THAP12O43422 761 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 NUDT21O43809 227 aaKnown RBP9.36□□□□□ -0.91
SMAD3-215ENST00000560424 GABBR2O75899 941 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 TNFP01375 233 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 TCN2P20062 427 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 MMP8P22894 467 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 CSTF2P33240 577 aaKnown RBP eCLIP9.36□□□□□ -0.91
SMAD3-215ENST00000560424 MAN1A1P33908 653 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 GGCXP38435 758 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 DCTP40126 519 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 NSFP46459 744 aaKnown RBP9.36□□□□□ -0.91
SMAD3-215ENST00000560424 PEX5P50542 639 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 SRP54P61011 504 aaKnown RBP9.36□□□□□ -0.91
SMAD3-215ENST00000560424 NME3Q13232 169 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 NAA30Q147X3 362 aaPredicted RBP9.36□□□□□ -0.91
SMAD3-215ENST00000560424 ALG11Q2TAA5 492 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 C14orf28Q4W4Y0 310 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 CARD16Q5EG05 197 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 CERCAMQ5T4B2 595 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 DCAF12Q5T6F0 453 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 TAF3Q5VWG9 929 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 C16orf46Q6P387 395 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 LRRC31Q6UY01 552 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 ASB18Q6ZVZ8 466 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 MON1BQ7L1V2 547 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 TMPRSS9Q7Z410 1059 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 SETD3Q86TU7 594 aaPredicted RBP9.36□□□□□ -0.91
SMAD3-215ENST00000560424 TTC7BQ86TV6 843 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 FAM129CQ86XR2 697 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 MCOLN2Q8IZK6 566 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 SLC35F6Q8N357 371 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 TMEM35BQ8NCS4 154 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 AGBL5Q8NDL9 886 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 GPR156Q8NFN8 814 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 CPT1CQ8TCG5 803 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 STK32AQ8WU08 396 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 TFAP2BQ92481 460 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 ART4Q93070 314 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 CENPTQ96BT3 561 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 PSMB7Q99436 277 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 ZSWIM1Q9BR11 485 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 SPON2Q9BUD6 331 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 DDA1Q9BW61 102 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 TM6SF2Q9BZW4 377 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 SIK2Q9H0K1 926 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 THAP2Q9H0W7 228 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 SLC39A1Q9NY26 324 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 HECAQ9UBI9 543 aaPredicted RBP9.36□□□□□ -0.91
SMAD3-215ENST00000560424 TFR2Q9UP52 801 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 PCDHB3Q9Y5E6 796 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 PCDHGA3Q9Y5H0 932 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 B3GALT1Q9Y5Z6 326 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 HS3ST4Q9Y661 456 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 ABCA12Q86UK0 2595 aa9.36□□□□□ -0.91
SMAD3-215ENST00000560424 C2CD3Q4AC94 2353 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 GRID2IPA4D2P6 1211 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 RHPN2P1A8MT19 583 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 KRIT1O00522 736 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 CES2O00748 559 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 DUX1O43812 170 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 MMP20O60882 483 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 IGLV3-25P01717 112 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 PRKCGP05129 697 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 FGF3P11487 239 aaPredicted RBP9.35□□□□□ -0.91
SMAD3-215ENST00000560424 NR1D1P20393 614 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 XPAP23025 273 aaPredicted RBP9.35□□□□□ -0.91
SMAD3-215ENST00000560424 COL8A1P27658 744 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 ALDH4A1P30038 563 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 OR1E1P30953 314 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 ABL2P42684 1182 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 SERPINH1P50454 418 aaKnown RBP9.35□□□□□ -0.91
SMAD3-215ENST00000560424 IRAK1P51617 712 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 RAB15P59190 212 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 SLC20A2Q08357 652 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 PTP4A2Q12974 167 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 NFATC4Q14934 902 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 LRRC14Q15048 493 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 POLD3Q15054 466 aaPredicted RBP9.35□□□□□ -0.91
SMAD3-215ENST00000560424 ZNF805Q5CZA5 627 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 C11orf63Q6NUN7 778 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 TFAP2DQ7Z6R9 452 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 CCDC13Q8IYE1 715 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 NLGN4XQ8N0W4 816 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 NLGN4YQ8NFZ3 816 aaPredicted RBP9.35□□□□□ -0.91
SMAD3-215ENST00000560424 SLC35G2Q8TBE7 412 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 CCDC74BQ96LY2 380 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 ATP13A1Q9HD20 1204 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 CASS4Q9NQ75 786 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 MBNL1Q9NR56 388 aaKnown RBP9.35□□□□□ -0.91
SMAD3-215ENST00000560424 SEPT11Q9NVA2 429 aaKnown RBP9.35□□□□□ -0.91
SMAD3-215ENST00000560424 FCF1Q9Y324 198 aaKnown RBP9.35□□□□□ -0.91
SMAD3-215ENST00000560424 KCTD3Q9Y597 815 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 MRFAP1Q9Y605 127 aa9.35□□□□□ -0.91
SMAD3-215ENST00000560424 A0A0D9SEW6 157 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 TCRBV5S1A1TA0A578 114 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 SEMA7AO75326 666 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 PALMO75781 387 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 CALB1P05937 261 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms