RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 K7ESM1 405 aa15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 PSMD11O00231 422 aa15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 PPP1R12AO14974 1030 aaPredicted RBP15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 PRLP01236 227 aa15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 PDHA1P08559 390 aa15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 HOXC4P09017 264 aaPredicted RBP15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 CYP2A6P11509 494 aaPredicted RBP15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 LHCGRP22888 699 aa15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 CTNNA1P35221 906 aaKnown RBP15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 TRIM23P36406 574 aa15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 ABCG1P45844 678 aa15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 MARCKSL1P49006 195 aa15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 RPL26P61254 145 aaKnown RBP15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 ADCY2Q08462 1091 aa15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 ITKQ08881 620 aa15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 ZBTB17Q13105 803 aa15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 INPP5AQ14642 412 aa15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 ZNF542PQ5EBM4 170 aa15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 TFDP3Q5H9I0 405 aa15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 ESRP1Q6NXG1 681 aaKnown RBP15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 NPNTQ6UXI9 565 aa15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 BZW1Q7L1Q6 419 aaKnown RBP15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 DAAM2Q86T65 1068 aa15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 PAF1Q8N7H5 531 aa15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 ACRBPQ8NEB7 543 aa15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 SPDYE1Q8NFV5 336 aaPredicted RBP15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 BTN2A2Q8WVV5 523 aa15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 KRT35Q92764 455 aa15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 APOLD1Q96LR9 279 aa15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 RPL26L1Q9UNX3 145 aaKnown RBP15.2■□□□□ 0.02
SNRPA1-210ENST00000560383 LRRK1Q38SD2 2015 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 COL27A1Q8IZC6 1860 aaPredicted RBP15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 hCG_1818297A0A087WSY0 165 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 LY6G6EA0A0G2JKS1 128 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 A0A0J9YYE9 177 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 NPIPB15A6NHN6 443 aaPredicted RBP15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 TPP1O14773 563 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 AQP9O43315 295 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 CST8O60676 142 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 MT-CO3P00414 261 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 TRBC1P01850 177 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 MMP2P08253 660 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 KRT10P13645 584 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 HOXB3P14651 431 aaPredicted RBP15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 JUNDP17535 347 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 TGM2P21980 687 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 EIF2S3P41091 472 aaKnown RBP15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 NFATC4Q14934 902 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 PRKD1Q15139 912 aaPredicted RBP15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 PPP2R5EQ16537 467 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 CDCP2Q5VXM1 449 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 USP45Q70EL2 814 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 NDUFAF2Q8N183 169 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 LRRC57Q8N9N7 239 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 PLA2G15Q8NCC3 412 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 TADA1Q96BN2 335 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 RBM41Q96IZ5 413 aaKnown RBP15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 LYSMD1Q96S90 227 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 APOOQ9BUR5 198 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 PCDHA3Q9Y5H8 950 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 AK5Q9Y6K8 562 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 U3KQA8 63 aa15.19■□□□□ 0.02
SNRPA1-210ENST00000560383 BAHCC1Q9P281 2608 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 LRP4O75096 1905 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 A8MX80 341 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 TLX3O43711 291 aaPredicted RBP15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 OPA1O60313 960 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 NEBLO76041 1014 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 CA4P22748 312 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 CTNNA2P26232 953 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 HTR1BP28222 390 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 KIAA1024LP59773 190 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 COPS2P61201 443 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 DYNLT1P63172 113 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 SKOR1P84550 965 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 AP1B1Q10567 949 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 ACOX1Q15067 660 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 SLC14A2Q15849 920 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 BBS12Q6ZW61 710 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 TECPR1Q7Z6L1 1165 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 RAVER1Q8IY67 606 aaKnown RBP15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 PHACTR4Q8IZ21 702 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 SPC24Q8NBT2 197 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 KIAA1524Q8TCG1 905 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 DTD2Q96FN9 168 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 DEPDC7Q96QD5 511 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 SAE1Q9UBE0 346 aaPredicted RBP15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 EFR3BQ9Y2G0 817 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 TTLL3Q9Y4R7 772 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 OR1A2Q9Y585 309 aa15.18■□□□□ 0.02
SNRPA1-210ENST00000560383 ANKRD36A6QL64 1941 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 CCDC66A2RUB6 948 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 GRID2IPA4D2P6 1211 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 RRP8O43159 456 aaKnown RBP15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 BRINP1O60477 761 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 PCCBP05166 539 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 ALPIP09923 528 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 PECAM1P16284 738 aaPredicted RBP15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 ZNF30P17039 623 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 TEAD1P28347 426 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms