RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 KIAA1958Q8N8K9 716 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 OR13J1Q8NGT2 312 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 ELMO2Q96JJ3 720 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 TRMT61BQ9BVS5 477 aaKnown RBP17.84■□□□□ 0.45
SNX1-208ENST00000559844 C1QTNF1Q9BXJ1 281 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 C20orf27Q9GZN8 174 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 ZNF395Q9H8N7 513 aaPredicted RBP17.84■□□□□ 0.45
SNX1-208ENST00000559844 RIMKLBQ9ULI2 386 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 TICRRQ7Z2Z1 1910 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 TYW5A2RUC4 315 aaKnown RBP17.84■□□□□ 0.45
SNX1-208ENST00000559844 G3V2L1 256 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 NDST3O95803 873 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 SLC35E2BP0CK96 405 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 TARSP26639 723 aaKnown RBP17.84■□□□□ 0.45
SNX1-208ENST00000559844 LEPRP48357 1165 aaKnown RBP17.84■□□□□ 0.45
SNX1-208ENST00000559844 PRAMEP78395 509 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 KRT72Q14CN4 511 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 OR52K2Q8NGK3 314 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 OR6Y1Q8NGX8 325 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 OTUB2Q96DC9 234 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 TMEM237Q96Q45 408 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.84■□□□□ 0.45
SNX1-208ENST00000559844 LNPEPQ9UIQ6 1025 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 DNAJC16Q9Y2G8 782 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 ARIH1Q9Y4X5 557 aaPredicted RBP17.84■□□□□ 0.45
SNX1-208ENST00000559844 CHD5Q8TDI0 1954 aa17.83■□□□□ 0.45
SNX1-208ENST00000559844 PHGDHO43175 533 aaKnown RBP17.83■□□□□ 0.44
SNX1-208ENST00000559844 ITM2AO43736 263 aa17.83■□□□□ 0.44
SNX1-208ENST00000559844 TSPAN3O60637 253 aa17.83■□□□□ 0.44
SNX1-208ENST00000559844 CCDC22O60826 627 aa17.83■□□□□ 0.44
SNX1-208ENST00000559844 TRIM13O60858 407 aa17.83■□□□□ 0.44
SNX1-208ENST00000559844 GDI1P31150 447 aa17.83■□□□□ 0.44
SNX1-208ENST00000559844 HNRNPH1P31943 449 aaKnown RBP17.83■□□□□ 0.44
SNX1-208ENST00000559844 SGSHP51688 502 aa17.83■□□□□ 0.44
SNX1-208ENST00000559844 AQP5P55064 265 aa17.83■□□□□ 0.44
SNX1-208ENST00000559844 KCNJ2P63252 427 aa17.83■□□□□ 0.44
SNX1-208ENST00000559844 ACVR1Q04771 509 aa17.83■□□□□ 0.44
SNX1-208ENST00000559844 ITGA9Q13797 1035 aa17.83■□□□□ 0.44
SNX1-208ENST00000559844 ZYG11AQ6WRX3 759 aa17.83■□□□□ 0.44
SNX1-208ENST00000559844 FAM217AQ8IXS0 508 aa17.83■□□□□ 0.44
SNX1-208ENST00000559844 GPATCH11Q8N954 259 aa17.83■□□□□ 0.44
SNX1-208ENST00000559844 BRSK1Q8TDC3 778 aa17.83■□□□□ 0.44
SNX1-208ENST00000559844 NXPE3Q969Y0 559 aa17.83■□□□□ 0.44
SNX1-208ENST00000559844 TSPAN17Q96FV3 270 aa17.83■□□□□ 0.44
SNX1-208ENST00000559844 FAM83CQ9BQN1 747 aa17.83■□□□□ 0.44
SNX1-208ENST00000559844 MUC3BQ9H195 1237 aa17.83■□□□□ 0.44
SNX1-208ENST00000559844 EBF3Q9H4W6 596 aa17.83■□□□□ 0.44
SNX1-208ENST00000559844 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.83■□□□□ 0.445e-12■■■■■ 28.5
SNX1-208ENST00000559844 HAO1Q9UJM8 370 aa17.83■□□□□ 0.44
SNX1-208ENST00000559844 RUVBL2Q9Y230 463 aaKnown RBP17.83■□□□□ 0.44
SNX1-208ENST00000559844 INSIG1O15503 277 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 LDB2O43679 373 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 MGRN1O60291 552 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 T-ENOLP0DO92 83 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 KITP10721 976 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 BMP1P13497 986 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 GMPRP36959 345 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 EML3Q32P44 896 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 RNF219Q5W0B1 726 aaPredicted RBP17.82■□□□□ 0.44
SNX1-208ENST00000559844 TPGS1Q6ZTW0 290 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 PARP9Q8IXQ6 854 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 CPXM2Q8N436 756 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 HJURPQ8NCD3 748 aaPredicted RBP17.82■□□□□ 0.44
SNX1-208ENST00000559844 SCYL1Q96KG9 808 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 MARCOQ9UEW3 520 aaPredicted RBP17.82■□□□□ 0.44
SNX1-208ENST00000559844 FCHO1O14526 889 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 TRAFD1O14545 582 aaPredicted RBP17.82■□□□□ 0.44
SNX1-208ENST00000559844 LYPLA1O75608 230 aaPredicted RBP17.82■□□□□ 0.44
SNX1-208ENST00000559844 ARSAP15289 507 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 NSUN2Q08J23 767 aaKnown RBP eCLIP17.82■□□□□ 0.44
SNX1-208ENST00000559844 ASPHQ12797 758 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 PDGFRLQ15198 375 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 CXorf57Q6NSI4 855 aaKnown RBP17.82■□□□□ 0.44
SNX1-208ENST00000559844 LRRC8EQ6NSJ5 796 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 CILP2Q8IUL8 1156 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 ADGRG2Q8IZP9 1017 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 SLC44A3Q8N4M1 653 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.82■□□□□ 0.44
SNX1-208ENST00000559844 STYXQ8WUJ0 223 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 KCTD4Q8WVF5 259 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 BHMTQ93088 406 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 HDAC10Q969S8 669 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 TRIB3Q96RU7 358 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 BRD9Q9H8M2 597 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 SCUBE2Q9NQ36 999 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 FBXO6Q9NRD1 293 aaPredicted RBP17.82■□□□□ 0.44
SNX1-208ENST00000559844 OXSMQ9NWU1 459 aa17.82■□□□□ 0.44
SNX1-208ENST00000559844 CBX4O00257 560 aa17.81■□□□□ 0.44
SNX1-208ENST00000559844 KLHL2O95198 593 aa17.81■□□□□ 0.44
SNX1-208ENST00000559844 CBX6O95503 412 aa17.81■□□□□ 0.44
SNX1-208ENST00000559844 CR2P20023 1033 aa17.81■□□□□ 0.44
SNX1-208ENST00000559844 CYTH1Q15438 398 aa17.81■□□□□ 0.44
SNX1-208ENST00000559844 PTAR1Q7Z6K3 402 aaPredicted RBP17.81■□□□□ 0.44
SNX1-208ENST00000559844 KIF2BQ8N4N8 673 aa17.81■□□□□ 0.44
SNX1-208ENST00000559844 OR6P1Q8NGX9 317 aa17.81■□□□□ 0.44
SNX1-208ENST00000559844 BLOC1S5Q8TDH9 187 aa17.81■□□□□ 0.44
SNX1-208ENST00000559844 NSL1Q96IY1 281 aa17.81■□□□□ 0.44
SNX1-208ENST00000559844 NUDCD1Q96RS6 583 aa17.81■□□□□ 0.44
SNX1-208ENST00000559844 NOD2Q9HC29 1040 aa17.81■□□□□ 0.44
SNX1-208ENST00000559844 DNAJC28Q9NX36 388 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms