RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 PRR23CQ6ZRP0 262 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 C14orf80Q86SX3 495 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 ELMO1Q92556 727 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 TRIM43Q96BQ3 446 aaPredicted RBP10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 ARMC5Q96C12 935 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 CLSTN3Q9BQT9 956 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 RAD18Q9NS91 495 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 TMEM59LQ9UK28 342 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 GPSM3Q9Y4H4 160 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 COMMD3-BMI1R4GMX3 469 aa10.68□□□□□ -0.7
CARMIL3-202ENST00000559694 TMEM189-UBE2V1I3L0A0 370 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 BTN3A1O00481 513 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 EDF1O60869 148 aaKnown RBP10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 FESP07332 822 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 TPBGLP0DKB5 382 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 MAT2AP31153 395 aaKnown RBP10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 MC4RP32245 332 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 TTPAP49638 278 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 AP1S1P61966 158 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 ADAM17P78536 824 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 TMEM240Q5SV17 173 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 ZNF598Q86UK7 904 aaKnown RBP10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 TCEAL8Q8IYN2 117 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 LZICQ8WZA0 190 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 SERAC1Q96JX3 654 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 ACTR8Q9H981 624 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 CHRAC1Q9NRG0 131 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 RPL26L1Q9UNX3 145 aaKnown RBP10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 CNTN6Q9UQ52 1028 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 J3KR12 359 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 CCL22O00626 93 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 HSPA13P48723 471 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 IL2P60568 153 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 C16orf72Q14CZ0 275 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 GSTA3Q16772 222 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 MTSS1LQ765P7 747 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 SETD3Q86TU7 594 aaPredicted RBP10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 CAMK1DQ8IU85 385 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 OR4L1Q8NH43 312 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 MED8Q96G25 268 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 PRPF18Q99633 342 aaKnown RBP10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 ILKAPQ9H0C8 392 aaPredicted RBP10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 GBA3Q9H227 469 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 ARHGEF3Q9NR81 526 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 ZNF229Q9UJW7 825 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 PCDHA11Q9Y5I1 949 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 HCFC2Q9Y5Z7 792 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 NRXN2Q9P2S2 1712 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 TMEM247A6NEH6 219 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 ZBTB14O43829 449 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 SERPINB5P36952 375 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 MBTPS1Q14703 1052 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 ADRM1Q16186 407 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 N4BP2L1Q5TBK1 243 aaPredicted RBP10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 AFTPHQ6ULP2 937 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 VITQ6UXI7 678 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 ZNF786Q8N393 782 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 ZNF398Q8TD17 642 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 WFIKKN2Q8TEU8 576 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 CYGBQ8WWM9 190 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 SPOCK2Q92563 424 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 CCDC126Q96EE4 140 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 HCFC1R1Q9NWW0 138 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 SLC13A4Q9UKG4 626 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 ARIH1Q9Y4X5 557 aaPredicted RBP10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 FAM237BA0A1B0GVD1 139 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 EME2A4GXA9 379 aaPredicted RBP10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 MAN1A2O60476 641 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 CDK14O94921 469 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 FAM189BP81408 668 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 MLLT1Q03111 559 aaPredicted RBP10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 TBL3Q12788 808 aaKnown RBP10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 DCTN2Q13561 401 aaKnown RBP10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 ITGA9Q13797 1035 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 FAM171BQ6P995 826 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 TTC33Q6PID6 262 aaPredicted RBP10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 KIAA2013Q8IYS2 634 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 WDR60Q8WVS4 1066 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 OVCA2Q8WZ82 227 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 CPT1BQ92523 772 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 TBATAQ96M53 351 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 GRIP2Q9C0E4 1043 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 ADAM7Q9H2U9 754 aa10.67□□□□□ -0.7
CARMIL3-202ENST00000559694 MAP1BP46821 2468 aaKnown RBP10.66□□□□□ -0.7
CARMIL3-202ENST00000559694 TRIOBPQ9H2D6 2365 aa10.66□□□□□ -0.7
CARMIL3-202ENST00000559694 TTC24A2A3L6 582 aaPredicted RBP10.66□□□□□ -0.7
CARMIL3-202ENST00000559694 HEPACAM2A8MVW5 462 aa10.66□□□□□ -0.7
CARMIL3-202ENST00000559694 CCNT2O60583 730 aaKnown RBP10.66□□□□□ -0.7
CARMIL3-202ENST00000559694 ASLP04424 464 aa10.66□□□□□ -0.7
CARMIL3-202ENST00000559694 FAM58BPP0C7Q3 252 aa10.66□□□□□ -0.7
CARMIL3-202ENST00000559694 ANPEPP15144 967 aa10.66□□□□□ -0.7
CARMIL3-202ENST00000559694 CYP2A7P20853 494 aa10.66□□□□□ -0.7
CARMIL3-202ENST00000559694 CRABP2P29373 138 aa10.66□□□□□ -0.7
CARMIL3-202ENST00000559694 CHRNA4P43681 627 aa10.66□□□□□ -0.7
CARMIL3-202ENST00000559694 CDK7P50613 346 aa10.66□□□□□ -0.7
CARMIL3-202ENST00000559694 PLOD1Q02809 727 aaPredicted RBP10.66□□□□□ -0.7
CARMIL3-202ENST00000559694 DSC1Q08554 894 aa10.66□□□□□ -0.7
CARMIL3-202ENST00000559694 ELP6Q0PNE2 266 aa10.66□□□□□ -0.7
CARMIL3-202ENST00000559694 KCTD21Q4G0X4 260 aa10.66□□□□□ -0.7
CARMIL3-202ENST00000559694 ALFQ53S48 1182 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms