RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 KIAA1024LP59773 190 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 SRP54P61011 504 aaKnown RBP12.6□□□□□ -0.39
LRRC28-214ENST00000559433 IFI35P80217 286 aaPredicted RBP12.6□□□□□ -0.39
LRRC28-214ENST00000559433 CYP4F3Q08477 520 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 NIPAL4Q0D2K0 466 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 ZBTB17Q13105 803 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 TARDBPQ13148 414 aaKnown RBP eCLIP12.6□□□□□ -0.39
LRRC28-214ENST00000559433 PTPRRQ15256 657 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 ELOCQ15369 112 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 TCEA2Q15560 299 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 ESRP1Q6NXG1 681 aaKnown RBP12.6□□□□□ -0.39
LRRC28-214ENST00000559433 MFSD7Q6UXD7 560 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 SPOCD1Q6ZMY3 1216 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 NYAP1Q6ZVC0 841 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 HSD11B1LQ7Z5J1 315 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 DAAM2Q86T65 1068 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 TSPAN33Q86UF1 283 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 PELI3Q8N2H9 469 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 FSTL5Q8N475 847 aaPredicted RBP12.6□□□□□ -0.39
LRRC28-214ENST00000559433 PIP4P2Q8N4L2 257 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 ARRDC2Q8TBH0 407 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 FUBP1Q96AE4 644 aaKnown RBP12.6□□□□□ -0.39
LRRC28-214ENST00000559433 PDXPQ96GD0 296 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 OLFM3Q96PB7 478 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 WDR26Q9H7D7 661 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 KCTD5Q9NXV2 234 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 GOLGA6AQ9NYA3 693 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 SEPT10Q9P0V9 454 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 CLCA2Q9UQC9 943 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 CHKBQ9Y259 395 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 EPN1Q9Y6I3 576 aaPredicted RBP12.6□□□□□ -0.39
LRRC28-214ENST00000559433 DMXL2Q8TDJ6 3036 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 LY6G6EA0A0G2JKS1 128 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 A0A0J9YYE9 177 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 A0A0U1RQS6 177 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 CAPN8A6NHC0 703 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 LMO7DNF2Z398 122 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 PSMD11O00231 422 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 PDE2AO00408 941 aaPredicted RBP12.59□□□□□ -0.39
LRRC28-214ENST00000559433 TPP1O14773 563 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 TNFP01375 233 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 TRBC1P01850 177 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 CELA2BP08218 269 aaPredicted RBP12.59□□□□□ -0.39
LRRC28-214ENST00000559433 TSHRP16473 764 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 KELP23276 732 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 CD86P42081 329 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 NAP1L1P55209 391 aaKnown RBP12.59□□□□□ -0.39
LRRC28-214ENST00000559433 INSM1Q01101 510 aaPredicted RBP12.59□□□□□ -0.39
LRRC28-214ENST00000559433 TFDP2Q14188 446 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 IHHQ14623 411 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 LLGL1Q15334 1064 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 NR0B2Q15466 257 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 CDKN3Q16667 212 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 KAZNQ674X7 775 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 LRRC66Q68CR7 880 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 PNCKQ6P2M8 343 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 RAD9BQ6WBX8 426 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 CCDC50Q8IVM0 306 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 KATNAL2Q8IYT4 538 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 LPCAT1Q8NF37 534 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 OR56A4Q8NGH8 313 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 MDM1Q8TC05 714 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 IFI44Q8TCB0 444 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 DTD2Q96FN9 168 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 SMIM14Q96QK8 99 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 CEP41Q9BYV8 373 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 CLPBQ9H078 707 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 PCDH9Q9HC56 1237 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 MOSPD1Q9UJG1 213 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 SALL4Q9UJQ4 1053 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.59□□□□□ -0.39
LRRC28-214ENST00000559433 PPIL1Q9Y3C6 166 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 U3KQA8 63 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 ZZEF1O43149 2961 aa12.59□□□□□ -0.39
LRRC28-214ENST00000559433 FREM2Q5SZK8 3169 aa12.58□□□□□ -0.4
LRRC28-214ENST00000559433 RCCD1A6NED2 376 aa12.58□□□□□ -0.4
LRRC28-214ENST00000559433 TMEM202A6NGA9 273 aa12.58□□□□□ -0.4
LRRC28-214ENST00000559433 YY2O15391 372 aa12.58□□□□□ -0.4
LRRC28-214ENST00000559433 CST8O60676 142 aa12.58□□□□□ -0.4
LRRC28-214ENST00000559433 ZRANB2O95218 330 aaKnown RBP eCLIP12.58□□□□□ -0.4
LRRC28-214ENST00000559433 MT-CO3P00414 261 aa12.58□□□□□ -0.4
LRRC28-214ENST00000559433 GP1BAP07359 652 aa12.58□□□□□ -0.4
LRRC28-214ENST00000559433 MMP2P08253 660 aa12.58□□□□□ -0.4
LRRC28-214ENST00000559433 HOXC4P09017 264 aaPredicted RBP12.58□□□□□ -0.4
LRRC28-214ENST00000559433 MYCLP1P12525 358 aaPredicted RBP12.58□□□□□ -0.4
LRRC28-214ENST00000559433 TRIM23P36406 574 aa12.58□□□□□ -0.4
LRRC28-214ENST00000559433 MARCKSL1P49006 195 aa12.58□□□□□ -0.4
LRRC28-214ENST00000559433 RPL26P61254 145 aaKnown RBP12.58□□□□□ -0.4
LRRC28-214ENST00000559433 SKOR1P84550 965 aa12.58□□□□□ -0.4
LRRC28-214ENST00000559433 CAMK2BQ13554 666 aa12.58□□□□□ -0.4
LRRC28-214ENST00000559433 TAZQ16635 292 aa12.58□□□□□ -0.4
LRRC28-214ENST00000559433 TFDP3Q5H9I0 405 aa12.58□□□□□ -0.4
LRRC28-214ENST00000559433 C6orf132Q5T0Z8 1188 aa12.58□□□□□ -0.4
LRRC28-214ENST00000559433 KCTD16Q68DU8 428 aa12.58□□□□□ -0.4
LRRC28-214ENST00000559433 RAET1GQ6H3X3 334 aa12.58□□□□□ -0.4
LRRC28-214ENST00000559433 CRTC1Q6UUV9 634 aa12.58□□□□□ -0.4
LRRC28-214ENST00000559433 Q6ZVL8 140 aa12.58□□□□□ -0.4
LRRC28-214ENST00000559433 B4GALNT4Q76KP1 1039 aa12.58□□□□□ -0.4
LRRC28-214ENST00000559433 BZW1Q7L1Q6 419 aaKnown RBP12.58□□□□□ -0.4
LRRC28-214ENST00000559433 HEATR4Q86WZ0 1026 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms