RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 FAM46CQ5VWP2 391 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 ZSWIM9Q86XI8 627 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 CTAGE3PQ8IX95 158 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 SRRM1Q8IYB3 904 aaKnown RBP16.59■□□□□ 0.25
TPM1-219ENST00000559397 TMEM105Q8N8V8 129 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 MDM1Q8TC05 714 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 HCAR2Q8TDS4 363 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 PTCD2Q8WV60 388 aaKnown RBP16.59■□□□□ 0.25
TPM1-219ENST00000559397 SPOCK2Q92563 424 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 ARRDC3Q96B67 414 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 SELENOSQ9BQE4 189 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 FSD1LQ9BXM9 530 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 TRABDQ9H4I3 376 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 MRM3Q9HC36 420 aaKnown RBP16.59■□□□□ 0.25
TPM1-219ENST00000559397 DKK3Q9UBP4 350 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 CHKBQ9Y259 395 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 IKBKGQ9Y6K9 419 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 IQANK1A0A1B0GTG1 560 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 KPNA3O00505 521 aaPredicted RBP16.59■□□□□ 0.25
TPM1-219ENST00000559397 MID1O15344 667 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 PAPSS2O95340 614 aaPredicted RBP16.59■□□□□ 0.25
TPM1-219ENST00000559397 ADH1BP00325 375 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 EPOP01588 193 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 KRT15P19012 456 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 SLC8A1P32418 973 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 SLC18A1P54219 525 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 MGAT5Q09328 741 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 MSLNQ13421 630 aaPredicted RBP16.59■□□□□ 0.25
TPM1-219ENST00000559397 POM121L1PQ3SYA9 428 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 PCID2Q5JVF3 399 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 ARMC12Q5T9G4 340 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 UNC5BQ8IZJ1 945 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 FEM1CQ96JP0 617 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 HHIPQ96QV1 700 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 ARIH1Q9Y4X5 557 aaPredicted RBP16.59■□□□□ 0.25
TPM1-219ENST00000559397 PCDHB9Q9Y5E1 797 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 A0A1W2PPM1 405 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 TMEM120BA0PK00 339 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 SRRM3A6NNA2 597 aaPredicted RBP16.58■□□□□ 0.24
TPM1-219ENST00000559397 UGT1A9O60656 530 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 ATXN1LP0C7T5 689 aaKnown RBP16.58■□□□□ 0.24
TPM1-219ENST00000559397 CHN1P15882 459 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 C5AR1P21730 350 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 CA4P22748 312 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 ITGB7P26010 798 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 CXCL12P48061 93 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 CCR3P51677 355 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 CDK18Q07002 472 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 MPP2Q14168 576 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 TTC19Q6DKK2 380 aaPredicted RBP16.58■□□□□ 0.24
TPM1-219ENST00000559397 CES3Q6UWW8 571 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 PARS2Q7L3T8 475 aaKnown RBP16.58■□□□□ 0.24
TPM1-219ENST00000559397 KDELC2Q7Z4H8 507 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 CACUL1Q86Y37 369 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 FBXL6Q8N531 539 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 AADATQ8N5Z0 425 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.58■□□□□ 0.24
TPM1-219ENST00000559397 TSTD1Q8NFU3 115 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 PDCD6IPQ8WUM4 868 aaKnown RBP16.58■□□□□ 0.24
TPM1-219ENST00000559397 PIH1D2Q8WWB5 315 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 ZNF669Q96BR6 464 aaPredicted RBP16.58■□□□□ 0.24
TPM1-219ENST00000559397 SIPA1Q96FS4 1042 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 CERS2Q96G23 380 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 UGT1A7Q9HAW7 530 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 UGT1A10Q9HAW8 530 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 UGT1A8Q9HAW9 530 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 SSU72Q9NP77 194 aaKnown RBP16.58■□□□□ 0.24
TPM1-219ENST00000559397 C11orf16Q9NQ32 467 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 CHRAC1Q9NRG0 131 aa16.58■□□□□ 0.24
TPM1-219ENST00000559397 A0A1W2PQ67 120 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 C16orf96A6NNT2 1141 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 K7ESF4 209 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 PRPF4O43172 522 aaKnown RBP eCLIP16.57■□□□□ 0.243e-6■■□□□ 14.1
TPM1-219ENST00000559397 TIMP2P16035 220 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 LSP1P33241 339 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 DRD3P35462 400 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 CHRNA4P43681 627 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 SERPINB9P50453 376 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 ZBTB16Q05516 673 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 SLC1A5Q15758 541 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 BRAT1Q6PJG6 821 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 SH2D5Q6ZV89 423 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 RASSF3Q86WH2 238 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 CNPY4Q8N129 248 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 MDGA1Q8NFP4 955 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 HMGB4Q8WW32 186 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 CDKL2Q92772 493 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 FAM131CQ96AQ9 280 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 MFSD3Q96ES6 412 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 IFT43Q96FT9 208 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 RANBP9Q96S59 729 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 HDAC8Q9BY41 377 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 SPATA6Q9NWH7 488 aaPredicted RBP16.57■□□□□ 0.24
TPM1-219ENST00000559397 SCML1Q9UN30 329 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 PPIL1Q9Y3C6 166 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 TCAF1Q9Y4C2 921 aa16.57■□□□□ 0.24
TPM1-219ENST00000559397 APBB3O95704 486 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 NDST3O95803 873 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 DNTTP04053 509 aa16.56■□□□□ 0.24
TPM1-219ENST00000559397 SNRPAP09012 282 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms