RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 DTD2Q96FN9 168 aa21.69■■□□□ 1.06
SNX1-206ENST00000559389 LENG8Q96PV6 779 aaPredicted RBP21.69■■□□□ 1.06
SNX1-206ENST00000559389 MYOCQ99972 504 aa21.69■■□□□ 1.06
SNX1-206ENST00000559389 ARRDC1-AS1Q9H2J1 176 aa21.69■■□□□ 1.06
SNX1-206ENST00000559389 TRABDQ9H4I3 376 aa21.69■■□□□ 1.06
SNX1-206ENST00000559389 MYLKQ15746 1914 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 A0A1B0GTW7 788 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 WNT9AO14904 365 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 BCAT2O15382 392 aaPredicted RBP21.68■■□□□ 1.06
SNX1-206ENST00000559389 TTI1O43156 1089 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 TPSB2P20231 275 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 IGFALSP35858 605 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 RACK1P63244 317 aaKnown RBP21.68■■□□□ 1.06
SNX1-206ENST00000559389 PTSQ03393 145 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 MSLNQ13421 630 aaPredicted RBP21.68■■□□□ 1.06
SNX1-206ENST00000559389 IRF4Q15306 451 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 TPSAB1Q15661 275 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 PLA2G2CQ5R387 149 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 DENND2CQ68D51 928 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 GCNT7Q6ZNI0 430 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 RABEPKQ7Z6M1 372 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 RAVER1Q8IY67 606 aaKnown RBP21.68■■□□□ 1.06
SNX1-206ENST00000559389 TTC30BQ8N4P2 665 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 BLOC1S5Q8TDH9 187 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 CENPTQ96BT3 561 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 EID2BQ96D98 161 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 NUS1Q96E22 293 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 ZFYVE1Q9HBF4 777 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 NCDNQ9UBB6 729 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 ASIC3Q9UHC3 531 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 SHOC2Q9UQ13 582 aa21.68■■□□□ 1.06
SNX1-206ENST00000559389 DOCK9Q9BZ29 2069 aa21.67■■□□□ 1.06
SNX1-206ENST00000559389 AURKAO14965 403 aa21.67■■□□□ 1.06
SNX1-206ENST00000559389 SLC4A1P02730 911 aa21.67■■□□□ 1.06
SNX1-206ENST00000559389 GNSP15586 552 aa21.67■■□□□ 1.06
SNX1-206ENST00000559389 ETV3P41162 512 aa21.67■■□□□ 1.06
SNX1-206ENST00000559389 CDK16Q00536 496 aa21.67■■□□□ 1.06
SNX1-206ENST00000559389 WSCD2Q2TBF2 565 aa21.67■■□□□ 1.06
SNX1-206ENST00000559389 PPP1R21Q6ZMI0 780 aa21.67■■□□□ 1.06
SNX1-206ENST00000559389 Q6ZVL8 140 aa21.67■■□□□ 1.06
SNX1-206ENST00000559389 GLT6D1Q7Z4J2 308 aa21.67■■□□□ 1.06
SNX1-206ENST00000559389 TMC3Q7Z5M5 1100 aa21.67■■□□□ 1.06
SNX1-206ENST00000559389 TECPR1Q7Z6L1 1165 aa21.67■■□□□ 1.06
SNX1-206ENST00000559389 OR52K1Q8NGK4 314 aa21.67■■□□□ 1.06
SNX1-206ENST00000559389 CPT1BQ92523 772 aa21.67■■□□□ 1.06
SNX1-206ENST00000559389 TRIM51Q9BSJ1 452 aa21.67■■□□□ 1.06
SNX1-206ENST00000559389 GPR63Q9BZJ6 419 aa21.67■■□□□ 1.06
SNX1-206ENST00000559389 CASS4Q9NQ75 786 aa21.67■■□□□ 1.06
SNX1-206ENST00000559389 AASDHPPTQ9NRN7 309 aa21.67■■□□□ 1.06
SNX1-206ENST00000559389 CA5BQ9Y2D0 317 aa21.67■■□□□ 1.06
SNX1-206ENST00000559389 A0A1W2PR77 199 aa21.66■■□□□ 1.06
SNX1-206ENST00000559389 PRR5-ARHGAP8B1AHC4 643 aa21.66■■□□□ 1.06
SNX1-206ENST00000559389 TMEM63AO94886 807 aa21.66■■□□□ 1.06
SNX1-206ENST00000559389 GRIA1P42261 906 aa21.66■■□□□ 1.06
SNX1-206ENST00000559389 CDH17Q12864 832 aa21.66■■□□□ 1.06
SNX1-206ENST00000559389 LRRC14Q15048 493 aa21.66■■□□□ 1.06
SNX1-206ENST00000559389 ANKRD22Q5VYY1 191 aa21.66■■□□□ 1.06
SNX1-206ENST00000559389 KYAT3Q6YP21 454 aaKnown RBP21.66■■□□□ 1.06
SNX1-206ENST00000559389 RFLNAQ6ZTI6 216 aa21.66■■□□□ 1.06
SNX1-206ENST00000559389 ZNF534Q76KX8 674 aa21.66■■□□□ 1.06
SNX1-206ENST00000559389 ASCL5Q7RTU5 278 aa21.66■■□□□ 1.06
SNX1-206ENST00000559389 ABI3BPQ7Z7G0 1075 aa21.66■■□□□ 1.06
SNX1-206ENST00000559389 MBNL1Q9NR56 388 aaKnown RBP21.66■■□□□ 1.06
SNX1-206ENST00000559389 PIH1D1Q9NWS0 290 aaKnown RBP21.66■■□□□ 1.06
SNX1-206ENST00000559389 KCTD5Q9NXV2 234 aa21.66■■□□□ 1.06
SNX1-206ENST00000559389 NFKBIL1Q9UBC1 381 aaPredicted RBP21.66■■□□□ 1.06
SNX1-206ENST00000559389 PCDH15Q96QU1 1955 aa21.65■■□□□ 1.06
SNX1-206ENST00000559389 ZNF106Q9H2Y7 1883 aaKnown RBP21.65■■□□□ 1.06
SNX1-206ENST00000559389 TCRBV7S3A2A0A539 114 aa21.65■■□□□ 1.06
SNX1-206ENST00000559389 FAM187AA6NFU0 413 aa21.65■■□□□ 1.06
SNX1-206ENST00000559389 A6NNZ2 444 aa21.65■■□□□ 1.06
SNX1-206ENST00000559389 WNT1P04628 370 aa21.65■■□□□ 1.06
SNX1-206ENST00000559389 HMGCLP35914 325 aa21.65■■□□□ 1.06
SNX1-206ENST00000559389 SPINT3P49223 89 aa21.65■■□□□ 1.06
SNX1-206ENST00000559389 AFF3P51826 1226 aaKnown RBP21.65■■□□□ 1.06
SNX1-206ENST00000559389 CLDN2P57739 230 aa21.65■■□□□ 1.06
SNX1-206ENST00000559389 DUOXA1Q1HG43 343 aa21.65■■□□□ 1.06
SNX1-206ENST00000559389 RNASEH2BQ5TBB1 312 aaKnown RBP21.65■■□□□ 1.06
SNX1-206ENST00000559389 LAYNQ6UX15 382 aa21.65■■□□□ 1.06
SNX1-206ENST00000559389 ZNF765Q7L2R6 523 aa21.65■■□□□ 1.06
SNX1-206ENST00000559389 CEP76Q8TAP6 659 aa21.65■■□□□ 1.06
SNX1-206ENST00000559389 RUBCNQ92622 972 aa21.65■■□□□ 1.06
SNX1-206ENST00000559389 PKD2L2Q9NZM6 624 aa21.65■■□□□ 1.06
SNX1-206ENST00000559389 RGSL1A5PLK6 1076 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 GOLGA8CPA6NN73 597 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 PATE3B3GLJ2 98 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 H0Y8X5 98 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 DNALI1O14645 258 aaPredicted RBP21.64■■□□□ 1.05
SNX1-206ENST00000559389 FPGTO14772 594 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 VILLO15195 856 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 RAD51CO43502 376 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 LRP3O75074 770 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 PCCBP05166 539 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 IVDP26440 423 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 CD38P28907 300 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 ADCY8P40145 1251 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 TERF1P54274 439 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 DCDC1P59894 354 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 STAT4Q14765 748 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 TAF1AQ15573 450 aaPredicted RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms