RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 ENTPD2Q9Y5L3 495 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 A0A0D9SEW6 157 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 A6NNZ2 444 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 ZNF821O75541 412 aaPredicted RBP11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 PAK4O96013 591 aaPredicted RBP11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 PRNPP04156 253 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 RHOCP08134 193 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 FAM153BP0C7A2 387 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 HNRNPKP61978 463 aaKnown RBP eCLIP11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 OTUD4Q01804 1114 aaKnown RBP11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 PDK2Q15119 407 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 PPP2R5EQ16537 467 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 FAM153CQ494X1 144 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 BBS12Q6ZW61 710 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 EFL1Q7Z2Z2 1120 aaKnown RBP11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 MTERF4Q7Z6M4 381 aaKnown RBP11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 DCP2Q8IU60 420 aaKnown RBP11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 MAP7D3Q8IWC1 876 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 IFT20Q8IY31 132 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 GRIN3AQ8TCU5 1115 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 TEKT4Q8WW24 435 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 CCDC114Q96M63 670 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 TMEM121Q9BTD3 319 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 DUSP23Q9BVJ7 150 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 SLC17A9Q9BYT1 436 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 DYRK4Q9NR20 520 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 FAM153AQ9UHL3 310 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 HEY1Q9Y5J3 304 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 WASF2Q9Y6W5 498 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 PTPN13Q12923 2485 aa11.29□□□□□ -0.6
RABGGTA-204ENST00000558376 UNC13CQ8NB66 2214 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 SPTY2D1-AS1A0A0U1RR47 76 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 K7ENP7 123 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 SPINT1O43278 529 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 LIASO43766 372 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 LEFTY1O75610 366 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 CSF2P04141 144 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 ZSCAN5DPP0CG00 497 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 NME1P15531 152 aaKnown RBP11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 RBMS1P29558 406 aaKnown RBP11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 PTPN7P35236 360 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 CXCR3P49682 368 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 VPS41P49754 854 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 CCDC15Q0P6D6 951 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 SLC10A2Q12908 348 aaPredicted RBP11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 BRD3Q15059 726 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 DPYSL2Q16555 572 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 DEFB133Q30KQ1 61 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 PERM1Q5SV97 790 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 BEND6Q5SZJ8 279 aaPredicted RBP11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 ZCCHC8Q6NZY4 707 aaKnown RBP11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 C22orf39Q6P5X5 142 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 INO80CQ6PI98 192 aaPredicted RBP11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 CRTC1Q6UUV9 634 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 KYAT3Q6YP21 454 aaKnown RBP11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 DPY19L3Q6ZPD9 716 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 ZC3H18Q86VM9 953 aaKnown RBP11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 PLD5Q8N7P1 536 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 OR7D4Q8NG98 312 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 ATL2Q8NHH9 583 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 MAIP1Q8WWC4 291 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 ERP44Q9BS26 406 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 IL36AQ9UHA7 158 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 ZNF148Q9UQR1 794 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 FADS3Q9Y5Q0 445 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 CSNK1G3Q9Y6M4 447 aa11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 TLN1Q9Y490 2541 aaKnown RBP11.28□□□□□ -0.6
RABGGTA-204ENST00000558376 EME2A4GXA9 379 aaPredicted RBP11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 CCDC151A5D8V7 595 aa11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 DRGXA6NNA5 263 aa11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 EIF2B5Q13144 721 aaKnown RBP11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 PPP1R7Q15435 360 aa11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 TP53INP2Q8IXH6 220 aa11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 TAB3Q8N5C8 712 aaPredicted RBP11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 FAM174AQ8TBP5 190 aa11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 FAM71BQ8TC56 605 aa11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 LMX1AQ8TE12 382 aa11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 PGAP3Q96FM1 320 aaPredicted RBP11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 MED8Q96G25 268 aa11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 CSPG4P5Q96PW8 444 aa11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 KLF6Q99612 283 aaPredicted RBP11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 C2orf49Q9BVC5 232 aaPredicted RBP11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 TCEAL2Q9H3H9 227 aaPredicted RBP11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 CLMPQ9H6B4 373 aa11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 EVA1BQ9NVM1 165 aa11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 ARHGEF38Q9NXL2 777 aa11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 MPP6Q9NZW5 540 aa11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 EFR3BQ9Y2G0 817 aa11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 UTP11Q9Y3A2 253 aaKnown RBP11.27□□□□□ -0.6
RABGGTA-204ENST00000558376 CDRT15L2A8MXV6 281 aa11.27□□□□□ -0.61
RABGGTA-204ENST00000558376 BHMG1C9JSJ3 638 aaPredicted RBP11.27□□□□□ -0.61
RABGGTA-204ENST00000558376 AQP9O43315 295 aa11.27□□□□□ -0.61
RABGGTA-204ENST00000558376 ZMPSTE24O75844 475 aa11.27□□□□□ -0.61
RABGGTA-204ENST00000558376 ECEL1O95672 775 aa11.27□□□□□ -0.61
RABGGTA-204ENST00000558376 ADRB3P13945 408 aa11.27□□□□□ -0.61
RABGGTA-204ENST00000558376 JUNDP17535 347 aa11.27□□□□□ -0.61
RABGGTA-204ENST00000558376 ECHS1P30084 290 aa11.27□□□□□ -0.61
RABGGTA-204ENST00000558376 RPL21P46778 160 aaKnown RBP11.27□□□□□ -0.61
RABGGTA-204ENST00000558376 FNTAP49354 379 aa11.27□□□□□ -0.61
RABGGTA-204ENST00000558376 GDF10P55107 478 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms