RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 PPM1HQ9ULR3 514 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 SNX11Q9Y5W9 270 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 ACTL7AQ9Y615 435 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 CEP295Q9C0D2 2601 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 CHD5Q8TDI0 1954 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 PCNX2A6NKB5 2137 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 ACACBO00763 2458 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 CBX4O00257 560 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 EEF2KO00418 725 aaKnown RBP10.38□□□□□ -0.75
TPM1-212ENST00000558347 WNT9AO14904 365 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 ALOX15BO15296 676 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 ZNF821O75541 412 aaPredicted RBP10.38□□□□□ -0.75
TPM1-212ENST00000558347 LRIG2O94898 1065 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 CER1O95813 267 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 CD160O95971 181 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 SPINK2P20155 84 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 ACVRL1P37023 503 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 ELF3P78545 371 aaPredicted RBP10.38□□□□□ -0.75
TPM1-212ENST00000558347 SIM1P81133 766 aaPredicted RBP10.38□□□□□ -0.75
TPM1-212ENST00000558347 ARF5P84085 180 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 SHC2P98077 582 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 CNTN1Q12860 1018 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 NOMO1Q15155 1222 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 RNASEH2BQ5TBB1 312 aaKnown RBP10.38□□□□□ -0.75
TPM1-212ENST00000558347 AGBL4Q5VU57 503 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 C22orf39Q6P5X5 142 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 IL27RAQ6UWB1 636 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 ZNF783Q6ZMS7 281 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 RFX8Q6ZV50 586 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 CENPUQ71F23 418 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 DSG4Q86SJ6 1040 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 TRABD2AQ86V40 505 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 NAXDQ8IW45 347 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 CHST14Q8NCH0 376 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 SLC35B2Q8TB61 432 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 SPON2Q9BUD6 331 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 TNKS2Q9H2K2 1166 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 ATP13A1Q9HD20 1204 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 SAYSD1Q9NPB0 183 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 TM7SF3Q9NS93 570 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 DNPEPQ9ULA0 475 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 ZNF148Q9UQR1 794 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 ANKRD6Q9Y2G4 727 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 TBC1D3DA0A087WVF3 549 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 TBC1D3IA0A087WXS9 549 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 TBC1D3EA0A087X179 549 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 TBC1D3KA0A087X1G2 549 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 EXOC1LA0A1B0GW35 172 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 TBC1D3FA6NER0 549 aaPredicted RBP10.38□□□□□ -0.75
TPM1-212ENST00000558347 TBC1D3LB9A6J9 549 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 C1QTNF3-AMACRE9PGA6 284 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 PLRG1O43660 514 aaKnown RBP10.38□□□□□ -0.75
TPM1-212ENST00000558347 WNT1P04628 370 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 TBC1D3HP0C7X1 549 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 ZNF883P0CG24 379 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 RHOQP17081 205 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 AMPD1P23109 780 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 CTSKP43235 329 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 NR2C2P49116 596 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 VPS41P49754 854 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 CCR5P51681 352 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 TPI1P60174 286 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 RACK1P63244 317 aaKnown RBP10.38□□□□□ -0.75
TPM1-212ENST00000558347 OTUD4Q01804 1114 aaKnown RBP10.38□□□□□ -0.75
TPM1-212ENST00000558347 GNA12Q03113 381 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 CBLBQ13191 982 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 PAFAH1B3Q15102 231 aaKnown RBP10.38□□□□□ -0.75
TPM1-212ENST00000558347 TEAD4Q15561 434 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 WLSQ5T9L3 541 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 FAM46CQ5VWP2 391 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 TBC1D3GQ6DHY5 549 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 TBC1D3CQ6IPX1 549 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 RWDD4Q6NW29 188 aaKnown RBP10.38□□□□□ -0.75
TPM1-212ENST00000558347 TBC1D3Q8IZP1 549 aaPredicted RBP10.38□□□□□ -0.75
TPM1-212ENST00000558347 ANKRD42Q8N9B4 389 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 ACTL9Q8TC94 416 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 MGARPQ8TDB4 240 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 ARRDC3Q96B67 414 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 FGFR1OP2Q9NVK5 253 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 TMEM248Q9NWD8 314 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 CTNNAL1Q9UBT7 734 aa10.38□□□□□ -0.75
TPM1-212ENST00000558347 DOCK9Q9BZ29 2069 aa10.37□□□□□ -0.75
TPM1-212ENST00000558347 TPRP12270 2363 aaKnown RBP10.37□□□□□ -0.75
TPM1-212ENST00000558347 ZFHX4Q86UP3 3567 aa10.37□□□□□ -0.75
TPM1-212ENST00000558347 A0A1W2PR77 199 aa10.37□□□□□ -0.75
TPM1-212ENST00000558347 VGLL3A8MV65 326 aa10.37□□□□□ -0.75
TPM1-212ENST00000558347 WASH4PA8MWX3 477 aa10.37□□□□□ -0.75
TPM1-212ENST00000558347 RASA4BC9J798 803 aa10.37□□□□□ -0.75
TPM1-212ENST00000558347 H0Y8X5 98 aa10.37□□□□□ -0.75
TPM1-212ENST00000558347 KPNA3O00505 521 aaPredicted RBP10.37□□□□□ -0.75
TPM1-212ENST00000558347 FGF10O15520 208 aaPredicted RBP10.37□□□□□ -0.75
TPM1-212ENST00000558347 SLC7A4O43246 635 aa10.37□□□□□ -0.75
TPM1-212ENST00000558347 RASA4O43374 803 aa10.37□□□□□ -0.75
TPM1-212ENST00000558347 LATO43561 262 aa10.37□□□□□ -0.75
TPM1-212ENST00000558347 CREB3O43889 395 aa10.37□□□□□ -0.75
TPM1-212ENST00000558347 CBFA2T3O75081 653 aa10.37□□□□□ -0.75
TPM1-212ENST00000558347 ATP5HO75947 161 aa10.37□□□□□ -0.75
TPM1-212ENST00000558347 PECAM1P16284 738 aaPredicted RBP10.37□□□□□ -0.75
TPM1-212ENST00000558347 TAC1P20366 129 aa10.37□□□□□ -0.75
TPM1-212ENST00000558347 MAT2AP31153 395 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms