RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 WHAMMP3Q1A5X7 153 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 PARP6Q2NL67 630 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 USP39Q53GS9 565 aaKnown RBP12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 PERM1Q5SV97 790 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 ARMC12Q5T9G4 340 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 ALG1LQ6GMV1 187 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 ERN2Q76MJ5 926 aaKnown RBP12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 LONP2Q86WA8 852 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 ZSWIM9Q86XI8 627 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 DEFB119Q8N690 84 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 SPATA4Q8NEY3 305 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 LPCAT1Q8NF37 534 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 IPMKQ8NFU5 416 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 OR14C36Q8NHC7 312 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 ZNF417Q8TAU3 575 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 GRK7Q8WTQ7 553 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 VOPP1Q96AW1 172 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 SCARF2Q96GP6 870 aaPredicted RBP12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 OXNAD1Q96HP4 312 aaPredicted RBP12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 ZNF641Q96N77 438 aaPredicted RBP12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 NSUN5Q96P11 429 aaKnown RBP12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 ZNF587Q96SQ5 575 aaPredicted RBP12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 FRRS1LQ9P0K9 344 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 FAM153AQ9UHL3 310 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 SCML1Q9UN30 329 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 MRFAP1Q9Y605 127 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 ZNF318Q5VUA4 2279 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 A8MX80 341 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 NEMP1O14524 444 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 TRAFD1O14545 582 aaPredicted RBP12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 SOCS5O75159 536 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 ZNF217O75362 1048 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 ANXA9O76027 345 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 PGLSO95336 258 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 ECEL1O95672 775 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 CPP00450 1065 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 ADRB3P13945 408 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 CTPS1P17812 591 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 CA4P22748 312 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 HOXA6P31267 233 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 ACSL1P33121 698 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 TNNT3P45378 269 aaPredicted RBP12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 LMAN1P49257 510 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 GEMP55040 296 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 WNT3AP56704 352 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 GALNT3Q14435 633 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 SPARCL1Q14515 664 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 PSAPL1Q6NUJ1 521 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 KBTBD6Q86V97 674 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 WDR5BQ86VZ2 330 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 SLC25A41Q8N5S1 370 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 BEND7Q8N7W2 519 aaPredicted RBP12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 ALKBH8Q96BT7 664 aaKnown RBP12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 RMDN1Q96DB5 314 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 RTP4Q96DX8 246 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 TOE1Q96GM8 510 aaKnown RBP12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 SPACA7Q96KW9 195 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 SMIM14Q96QK8 99 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 APOL2Q9BQE5 337 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 MLPHQ9BV36 600 aaPredicted RBP12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 FICDQ9BVA6 458 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 TDRD1Q9BXT4 1180 aaKnown RBP12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 BTBD1Q9H0C5 482 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 PCDH9Q9HC56 1237 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 USP36Q9P275 1121 aaKnown RBP12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 PAK5Q9P286 719 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 FEZ2Q9UHY8 353 aaPredicted RBP12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 MKL2Q9ULH7 1088 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 ABCA7Q8IZY2 2146 aa12.08□□□□□ -0.48
HMGB1P8-201ENST00000558211 TBC1D3DA0A087WVF3 549 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 TBC1D3IA0A087WXS9 549 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 TBC1D3EA0A087X179 549 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 TBC1D3KA0A087X1G2 549 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 IGHV1OR15-9A0A0B4J2B8 117 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 TBC1D3FA6NER0 549 aaPredicted RBP12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 TBC1D3LB9A6J9 549 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 E7EVH7 732 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 J3QW42 95 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 HTRA2O43464 458 aaPredicted RBP12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 NDUFS2O75306 463 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 PCDH8O95206 1070 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 GAS8O95995 478 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 AGTP01019 485 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 TBC1D3HP0C7X1 549 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 BCKDHBP21953 392 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 CD6P30203 668 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 OXTRP30559 389 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 FDFT1P37268 417 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 POLR2LP62875 67 aaKnown RBP12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 FAM193AP78312 1265 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 BASP1P80723 227 aaKnown RBP12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 DR1Q01658 176 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 CDK18Q07002 472 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 CCDC15Q0P6D6 951 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 GPS1Q13098 491 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 MPP3Q13368 585 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 OLIG2Q13516 323 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 TUBB2AQ13885 445 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 PTPRRQ15256 657 aa12.07□□□□□ -0.48
HMGB1P8-201ENST00000558211 UGP2Q16851 508 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms