RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 IVDP26440 423 aa21.27■■□□□ 1
CASC4-204ENST00000557945 RPL21P46778 160 aaKnown RBP21.27■■□□□ 1
CASC4-204ENST00000557945 STC1P52823 247 aa21.27■■□□□ 1
CASC4-204ENST00000557945 SESN2P58004 480 aaPredicted RBP21.27■■□□□ 1
CASC4-204ENST00000557945 SLC7A5Q01650 507 aa21.27■■□□□ 1
CASC4-204ENST00000557945 SEPT6Q14141 434 aa21.27■■□□□ 1
CASC4-204ENST00000557945 POU6F1Q14863 301 aa21.27■■□□□ 1
CASC4-204ENST00000557945 HINFPQ9BQA5 517 aa21.27■■□□□ 1
CASC4-204ENST00000557945 C1QTNF7Q9BXJ2 289 aa21.27■■□□□ 1
CASC4-204ENST00000557945 FZD3Q9NPG1 666 aa21.27■■□□□ 1
CASC4-204ENST00000557945 A0A1W2PPC4 97 aa21.26■□□□□ 0.99
CASC4-204ENST00000557945 AP3B1O00203 1094 aa21.26■□□□□ 0.99
CASC4-204ENST00000557945 WNT9AO14904 365 aa21.26■□□□□ 0.99
CASC4-204ENST00000557945 ITPKAP23677 461 aa21.26■□□□□ 0.99
CASC4-204ENST00000557945 CD27P26842 260 aa21.26■□□□□ 0.99
CASC4-204ENST00000557945 NUDT1P36639 197 aa21.26■□□□□ 0.99
CASC4-204ENST00000557945 ETV3P41162 512 aa21.26■□□□□ 0.99
CASC4-204ENST00000557945 CERCAMQ5T4B2 595 aa21.26■□□□□ 0.99
CASC4-204ENST00000557945 MCUQ8NE86 351 aa21.26■□□□□ 0.99
CASC4-204ENST00000557945 SERAC1Q96JX3 654 aa21.26■□□□□ 0.99
CASC4-204ENST00000557945 COQ10AQ96MF6 247 aa21.26■□□□□ 0.99
CASC4-204ENST00000557945 EBF2Q9HAK2 575 aa21.26■□□□□ 0.99
CASC4-204ENST00000557945 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.26■□□□□ 0.99
CASC4-204ENST00000557945 ANAPC5Q9UJX4 755 aa21.26■□□□□ 0.99
CASC4-204ENST00000557945 SMG5Q9UPR3 1016 aaKnown RBP21.26■□□□□ 0.99
CASC4-204ENST00000557945 DMTF1Q9Y222 760 aa21.26■□□□□ 0.99
CASC4-204ENST00000557945 FANCMQ8IYD8 2048 aa21.26■□□□□ 0.99
CASC4-204ENST00000557945 MUC6Q6W4X9 2439 aa21.26■□□□□ 0.99
CASC4-204ENST00000557945 GON4LQ3T8J9 2241 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 SPAG17Q6Q759 2223 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 ATXN2Q99700 1313 aaKnown RBP21.25■□□□□ 0.99
CASC4-204ENST00000557945 BUD23O43709 281 aaKnown RBP21.25■□□□□ 0.99
CASC4-204ENST00000557945 SEC31AO94979 1220 aaKnown RBP21.25■□□□□ 0.99
CASC4-204ENST00000557945 CRTAMO95727 393 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 HNRNPA2B1P22626 353 aaKnown RBP21.25■□□□□ 0.99
CASC4-204ENST00000557945 AKT2P31751 481 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 ITGA8P53708 1063 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 CREB5Q02930 508 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 MTM1Q13496 603 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 DUPD1Q68J44 220 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 LRRC8BQ6P9F7 803 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 RFLNAQ6ZTI6 216 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 Q6ZVL8 140 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 ZNF534Q76KX8 674 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 CYP2U1Q7Z449 544 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 TMC3Q7Z5M5 1100 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 TTC30BQ8N4P2 665 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 BBOF1Q8ND07 529 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 BRSK1Q8TDC3 778 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 ASB12Q8WXK4 309 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 DNASE2BQ8WZ79 361 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 PIGKQ92643 395 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 EID2BQ96D98 161 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 NUS1Q96E22 293 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 PKD2L2Q9NZM6 624 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 BFARQ9NZS9 450 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 CD84Q9UIB8 345 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 ARL5AQ9Y689 179 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 WDFY4Q6ZS81 3184 aa21.25■□□□□ 0.99
CASC4-204ENST00000557945 C2orf81A6NN90 581 aa21.24■□□□□ 0.99
CASC4-204ENST00000557945 RAD51BO15315 384 aa21.24■□□□□ 0.99
CASC4-204ENST00000557945 GM2AP17900 193 aa21.24■□□□□ 0.99
CASC4-204ENST00000557945 CALCOCO2Q13137 446 aa21.24■□□□□ 0.99
CASC4-204ENST00000557945 MSLNQ13421 630 aaPredicted RBP21.24■□□□□ 0.99
CASC4-204ENST00000557945 MORF4L2Q15014 288 aa21.24■□□□□ 0.99
CASC4-204ENST00000557945 LRRC14Q15048 493 aa21.24■□□□□ 0.99
CASC4-204ENST00000557945 TAF1AQ15573 450 aaPredicted RBP21.24■□□□□ 0.99
CASC4-204ENST00000557945 GLE1Q53GS7 698 aaKnown RBP21.24■□□□□ 0.99
CASC4-204ENST00000557945 HOOK3Q86VS8 718 aa21.24■□□□□ 0.99
CASC4-204ENST00000557945 CBARPQ8N350 705 aaPredicted RBP21.24■□□□□ 0.99
CASC4-204ENST00000557945 LRRN4CLQ8ND94 238 aa21.24■□□□□ 0.99
CASC4-204ENST00000557945 DTD2Q96FN9 168 aa21.24■□□□□ 0.99
CASC4-204ENST00000557945 XAB2Q9HCS7 855 aaKnown RBP21.24■□□□□ 0.99
CASC4-204ENST00000557945 BPIFA1Q9NP55 256 aa21.24■□□□□ 0.99
CASC4-204ENST00000557945 AASDHPPTQ9NRN7 309 aa21.24■□□□□ 0.99
CASC4-204ENST00000557945 CEP192Q8TEP8 1941 aa21.24■□□□□ 0.99
CASC4-204ENST00000557945 PRAMEF26H0Y7S4 382 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 NDC80O14777 642 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 STX7O15400 261 aaKnown RBP21.23■□□□□ 0.99
CASC4-204ENST00000557945 AVILO75366 819 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 LPOP22079 712 aaPredicted RBP21.23■□□□□ 0.99
CASC4-204ENST00000557945 MGAT1P26572 445 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 NPY2RP49146 381 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 SPINT3P49223 89 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 WSCD2Q2TBF2 565 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 CCDC38Q502W7 563 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 HIBCHQ6NVY1 386 aaPredicted RBP21.23■□□□□ 0.99
CASC4-204ENST00000557945 TECPR1Q7Z6L1 1165 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 CAND1Q86VP6 1230 aaKnown RBP21.23■□□□□ 0.99
CASC4-204ENST00000557945 ZCCHC9Q8N567 271 aaKnown RBP21.23■□□□□ 0.99
CASC4-204ENST00000557945 SLC6A18Q96N87 628 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 SERPINB12Q96P63 405 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 LENG8Q96PV6 779 aaPredicted RBP21.23■□□□□ 0.99
CASC4-204ENST00000557945 ORAI3Q9BRQ5 295 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 WHRNQ9P202 907 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 CA5BQ9Y2D0 317 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 FNDC3AQ9Y2H6 1198 aaKnown RBP21.23■□□□□ 0.99
CASC4-204ENST00000557945 PKP3Q9Y446 797 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 KCTD3Q9Y597 815 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 SLCO1B1Q9Y6L6 691 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms