RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, human

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLIRP-211	ENST00000557623	ACTL9	Q8TC94	416 aa		12.52	□□□□□ -0.41
SLIRP-211	ENST00000557623	SAP25	Q8TEE9	199 aa		12.52	□□□□□ -0.41
SLIRP-211	ENST00000557623	HTR3C	Q8WXA8	447 aa		12.52	□□□□□ -0.41
SLIRP-211	ENST00000557623	CEP41	Q9BYV8	373 aa		12.52	□□□□□ -0.41
SLIRP-211	ENST00000557623	LZTFL1	Q9NQ48	299 aa		12.52	□□□□□ -0.41
SLIRP-211	ENST00000557623	MBNL1	Q9NR56	388 aa	Known RBP	12.52	□□□□□ -0.41
SLIRP-211	ENST00000557623	KLHL8	Q9P2G9	620 aa	Predicted RBP	12.52	□□□□□ -0.41
SLIRP-211	ENST00000557623	TRHDE	Q9UKU6	1024 aa		12.52	□□□□□ -0.41
SLIRP-211	ENST00000557623	PCOLCE2	Q9UKZ9	415 aa		12.52	□□□□□ -0.41
SLIRP-211	ENST00000557623	PPP2R2C	Q9Y2T4	447 aa		12.52	□□□□□ -0.41
SLIRP-211	ENST00000557623	KNL1	Q8NG31	2342 aa		12.52	□□□□□ -0.41
SLIRP-211	ENST00000557623	LRP4	O75096	1905 aa		12.52	□□□□□ -0.41
SLIRP-211	ENST00000557623	SPTBN4	Q9H254	2564 aa		12.52	□□□□□ -0.41
SLIRP-211	ENST00000557623	WDR87	Q6ZQQ6	2873 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	CAPN8	A6NHC0	703 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	NPIPB15	A6NHN6	443 aa	Predicted RBP	12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	ANKRD66	B4E2M5	251 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	GIPC1	O14908	333 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	STK10	O94804	968 aa	Known RBP	12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	PRL	P01236	227 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	PCCB	P05166	539 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	CTPS1	P17812	591 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	HTR1B	P28222	390 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	HNF1B	P35680	557 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	TNNT3	P45378	269 aa	Predicted RBP	12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	EIF3E	P60228	445 aa	Known RBP	12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	HNRNPK	P61978	463 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	WASHC5	Q12768	1159 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	ZNF211	Q13398	564 aa	Predicted RBP	12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	FZD2	Q14332	565 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	IHH	Q14623	411 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	TRIP6	Q15654	476 aa	Known RBP	12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	SEL1L2	Q5TEA6	688 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	CCDC70	Q6NSX1	233 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	AADACL2	Q6P093	401 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	PID1	Q7Z2X4	250 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	RAVER1	Q8IY67	606 aa	Known RBP	12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	LPCAT1	Q8NF37	534 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	BTN2A2	Q8WVV5	523 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	NUS1	Q96E22	293 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	COQ10A	Q96MF6	247 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	CAMK1G	Q96NX5	476 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	RBM15	Q96T37	977 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	MLPH	Q9BV36	600 aa	Predicted RBP	12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	DNAJC28	Q9NX36	388 aa		12.51	□□□□□ -0.41
SLIRP-211	ENST00000557623	DCHS1	Q96JQ0	3298 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	NEMP2	A6NFY4	417 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	CBFA2T3	O75081	653 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	CSF2	P04141	144 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	ADRB1	P08588	477 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	ALPI	P09923	528 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	RBP3	P10745	1247 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	LHCGR	P22888	699 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	RBL1	P28749	1068 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	BLK	P51451	505 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	CDK18	Q07002	472 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	BNIP3	Q12983	259 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	INPP5A	Q14642	412 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	RPS6KA1	Q15418	735 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	HS1BP3	Q53T59	392 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	MEI1	Q5TIA1	1274 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	DENND2C	Q68D51	928 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	ITPRIPL1	Q6GPH6	555 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	ESRP1	Q6NXG1	681 aa	Known RBP	12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	DARS2	Q6PI48	645 aa	Known RBP	12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	CRTC1	Q6UUV9	634 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	MACC1	Q6ZN28	852 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	GLRX5	Q86SX6	157 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	GATAD2A	Q86YP4	633 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	ZNF567	Q8N184	647 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	CBARP	Q8N350	705 aa	Predicted RBP	12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	TRIM58	Q8NG06	486 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	BAHD1	Q8TBE0	780 aa	Predicted RBP	12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	TADA1	Q96BN2	335 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	DTD2	Q96FN9	168 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	FCRL5	Q96RD9	977 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	LYSMD1	Q96S90	227 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	SRPK1	Q96SB4	655 aa	Known RBP	12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	HERPUD2	Q9BSE4	406 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	APOO	Q9BUR5	198 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	FAM153A	Q9UHL3	310 aa		12.5	□□□□□ -0.41
SLIRP-211	ENST00000557623	CACNB4	O00305	520 aa	Predicted RBP	12.49	□□□□□ -0.41
SLIRP-211	ENST00000557623	PDE2A	O00408	941 aa	Predicted RBP	12.49	□□□□□ -0.41
SLIRP-211	ENST00000557623	PIAS2	O75928	621 aa		12.49	□□□□□ -0.41
SLIRP-211	ENST00000557623	PYGL	P06737	847 aa		12.49	□□□□□ -0.41
SLIRP-211	ENST00000557623	HOXC4	P09017	264 aa	Predicted RBP	12.49	□□□□□ -0.41
SLIRP-211	ENST00000557623	NME1	P15531	152 aa	Known RBP	12.49	□□□□□ -0.41
SLIRP-211	ENST00000557623	TSHR	P16473	764 aa		12.49	□□□□□ -0.41
SLIRP-211	ENST00000557623	JUND	P17535	347 aa		12.49	□□□□□ -0.41
SLIRP-211	ENST00000557623	GM2A	P17900	193 aa		12.49	□□□□□ -0.41
SLIRP-211	ENST00000557623	NFKB1	P19838	968 aa		12.49	□□□□□ -0.41
SLIRP-211	ENST00000557623	KEL	P23276	732 aa		12.49	□□□□□ -0.41
SLIRP-211	ENST00000557623	DGKA	P23743	735 aa		12.49	□□□□□ -0.41
SLIRP-211	ENST00000557623	CD68	P34810	354 aa	Predicted RBP	12.49	□□□□□ -0.41
SLIRP-211	ENST00000557623	SIM1	P81133	766 aa	Predicted RBP	12.49	□□□□□ -0.41
SLIRP-211	ENST00000557623	KCNC4	Q03721	635 aa		12.49	□□□□□ -0.41
SLIRP-211	ENST00000557623	MPP3	Q13368	585 aa		12.49	□□□□□ -0.41
SLIRP-211	ENST00000557623	NFATC4	Q14934	902 aa		12.49	□□□□□ -0.41
SLIRP-211	ENST00000557623	PCSK7	Q16549	785 aa		12.49	□□□□□ -0.41
SLIRP-211	ENST00000557623	QPCT	Q16769	361 aa		12.49	□□□□□ -0.41

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