RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 EEF1DP29692 281 aaKnown RBP15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 GRIA3P42263 894 aa15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 GNA12Q03113 381 aa15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 CILP2Q8IUL8 1156 aa15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 FBXO22Q8NEZ5 403 aa15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 RP9Q8TA86 221 aaKnown RBP15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 RPL10LQ96L21 214 aaKnown RBP15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 DEFB118Q96PH6 123 aa15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 TUBGCP5Q96RT8 1024 aa15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 Q9H521 79 aa15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 FCF1Q9Y324 198 aaKnown RBP15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 GRID2O43424 1007 aa15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 NIPSNAP2O75323 286 aa15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 INHAP05111 366 aa15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 GJA1P17302 382 aa15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 HTRA3P83110 453 aa15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 RAD51Q06609 339 aa15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 HECTD3Q5T447 861 aa15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 MRPL10Q7Z7H8 261 aaKnown RBP15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 NMD3Q96D46 503 aaKnown RBP15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 TSGA13Q96PP4 275 aa15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 ACOX2Q99424 681 aa15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 STN1Q9H668 368 aaKnown RBP15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 FKBPLQ9UIM3 349 aa15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 AGO1Q9UL18 857 aaKnown RBP15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 SCML2Q9UQR0 700 aa15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 TRIM17Q9Y577 477 aa15.35■□□□□ 0.05
TMEM55B-207ENST00000557041 NPEPPSL1A6NEC2 478 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 CCNIQ14094 377 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 POM121L1PQ3SYA9 428 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 SPDYE1Q8NFV5 336 aaPredicted RBP15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 SH3RF2Q8TEC5 729 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 CAAP1Q9H8G2 361 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 PKP3Q9Y446 797 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 FAM149AA5PLN7 773 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 FFAR3O14843 346 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 MUSKO15146 869 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 GPR42O15529 346 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 TBL1XO60907 577 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 SH3BGRLO75368 114 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 ZNF189O75820 626 aaPredicted RBP15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 C1QTNF8P60827 252 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 IL1RL1Q01638 556 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 TRIP4Q15650 581 aaPredicted RBP15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 FAM151BQ6UXP7 276 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 C2CD4AQ8NCU7 369 aaPredicted RBP15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 ACTRT2Q8TDY3 377 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 CCDC126Q96EE4 140 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 SEPHS2Q99611 448 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 PIDD1Q9HB75 910 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 VPS45Q9NRW7 570 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 CLIC5Q9NZA1 410 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 RPL26L1Q9UNX3 145 aaKnown RBP15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 UNCXA6NJT0 531 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 OR1I1O60431 355 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 SMNDC1O75940 238 aaKnown RBP eCLIP15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 S100BP04271 92 aaPredicted RBP15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 SLC10A3P09131 477 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 MC4RP32245 332 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 CPOXP36551 454 aa15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 SETD3Q86TU7 594 aaPredicted RBP15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 ST13P5Q8NFI4 369 aaPredicted RBP15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 MTFMTQ96DP5 389 aaKnown RBP15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 PRPF18Q99633 342 aaKnown RBP15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 NOL6Q9H6R4 1146 aaKnown RBP15.34■□□□□ 0.05
TMEM55B-207ENST00000557041 CDC7O00311 574 aa15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 TNFRSF10BO14763 440 aa15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 LYNP07948 512 aa15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 HSPA8P11142 646 aaKnown RBP15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 GGT5P36269 586 aa15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 KCNC1P48547 511 aa15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 CCNHP51946 323 aaPredicted RBP15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 TPD52P55327 224 aaPredicted RBP15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 PLOD1Q02809 727 aaPredicted RBP15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 CREB5Q02930 508 aa15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 RBBP5Q15291 538 aaKnown RBP15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 TMEM259Q4ZIN3 620 aa15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 C6orf52Q5T4I8 152 aa15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 STXBP5Q5T5C0 1151 aa15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 RSPO2Q6UXX9 243 aaPredicted RBP15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 COLGALT2Q8IYK4 626 aa15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 PQLC1Q8N2U9 271 aa15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 JADE3Q92613 823 aa15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 PPP2R3CQ969Q6 453 aa15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 IMP4Q96G21 291 aaKnown RBP15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 PPP1R2P1Q96PQ5 205 aa15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 HGH1Q9BTY7 390 aa15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 OLA1Q9NTK5 396 aaKnown RBP15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 CROTQ9UKG9 612 aa15.33■□□□□ 0.05
TMEM55B-207ENST00000557041 E7ENX8 843 aa15.33■□□□□ 0.04
TMEM55B-207ENST00000557041 H3BMM5 538 aa15.33■□□□□ 0.04
TMEM55B-207ENST00000557041 PIP5K1BO14986 540 aa15.33■□□□□ 0.04
TMEM55B-207ENST00000557041 VPS26AO75436 327 aa15.33■□□□□ 0.04
TMEM55B-207ENST00000557041 GMNNO75496 209 aa15.33■□□□□ 0.04
TMEM55B-207ENST00000557041 CYP11A1P05108 521 aa15.33■□□□□ 0.04
TMEM55B-207ENST00000557041 PYGLP06737 847 aa15.33■□□□□ 0.04
TMEM55B-207ENST00000557041 ARCN1P48444 511 aaKnown RBP15.33■□□□□ 0.04
TMEM55B-207ENST00000557041 FOLH1Q04609 750 aa15.33■□□□□ 0.04
TMEM55B-207ENST00000557041 TUBB3Q13509 450 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms