RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 SERPING1P05155 500 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 ATP5BP06576 529 aaKnown RBP5.29□□□□□ -1.56
SRP54-211ENST00000556445 TUBBP07437 444 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 CCDC159P0C7I6 412 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 SUPT20HL2P0C7V6 817 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 RSPH10BP0C881 870 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 CETPP11597 493 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 CKBP12277 381 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 LAMP2P13473 410 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 TYRP14679 529 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 GABRB3P28472 473 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 NMT1P30419 496 aaKnown RBP5.29□□□□□ -1.56
SRP54-211ENST00000556445 ADRA1BP35368 520 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 GCLCP48506 637 aaPredicted RBP5.29□□□□□ -1.56
SRP54-211ENST00000556445 VAV2P52735 878 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 PPP5CP53041 499 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 NOMO3P69849 1222 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 CXADRP78310 365 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 HSD11B2P80365 405 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 GTF2BQ00403 316 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.29□□□□□ -1.56
SRP54-211ENST00000556445 GOLGA8FQ08AF8 430 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 GOLGA8DPQ0D2H9 430 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 LRRC74AQ0VAA2 488 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 KIF5AQ12840 1032 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 ADIPOQQ15848 244 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 KYNUQ16719 465 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 WSCD2Q2TBF2 565 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 ARHGAP15Q53QZ3 475 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 NOMO2Q5JPE7 1267 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 ABHD17BQ5VST6 288 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 C11orf88Q6PI97 169 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 DCLRE1AQ6PJP8 1040 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 CRTC1Q6UUV9 634 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 RAD9BQ6WBX8 426 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 RRAGAQ7L523 313 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 HAUS6Q7Z4H7 955 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 PXKQ7Z7A4 578 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 PDCL2Q8N4E4 241 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 CEP112Q8N8E3 955 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 C3orf20Q8ND61 904 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 ZNF540Q8NDQ6 660 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 GSDMBQ8TAX9 411 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 USP6NLQ92738 828 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 NACC2Q96BF6 587 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 ZNF764Q96H86 408 aaPredicted RBP5.29□□□□□ -1.56
SRP54-211ENST00000556445 CEP170P1Q96L14 293 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 MRGPRX1Q96LB2 322 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 FAM81BQ96LP2 452 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 COQ10AQ96MF6 247 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 ALS2CR12Q96Q35 445 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 NTPCRQ9BSD7 190 aaKnown RBP5.29□□□□□ -1.56
SRP54-211ENST00000556445 STRA6Q9BX79 667 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 ALOXE3Q9BYJ1 711 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 GSTO2Q9H4Y5 243 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 TAF1DQ9H5J8 278 aaPredicted RBP5.29□□□□□ -1.56
SRP54-211ENST00000556445 NHEJ1Q9H9Q4 299 aaPredicted RBP5.29□□□□□ -1.56
SRP54-211ENST00000556445 AGPAT3Q9NRZ7 376 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 FAM207AQ9NSI2 230 aaPredicted RBP5.29□□□□□ -1.56
SRP54-211ENST00000556445 SACM1LQ9NTJ5 587 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 TMEM74BQ9NUR3 256 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 TDP1Q9NUW8 608 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 DMAC2Q9NW81 257 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 AIPL1Q9NZN9 384 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 TBC1D14Q9P2M4 693 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 MORF4L1Q9UBU8 362 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 SH3BGRL2Q9UJC5 107 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 ZNF215Q9UL58 517 aaPredicted RBP5.29□□□□□ -1.56
SRP54-211ENST00000556445 DUSP12Q9UNI6 340 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 PIAS3Q9Y6X2 628 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 OTOFQ9HC10 1997 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 WDR81Q562E7 1941 aa5.29□□□□□ -1.56
SRP54-211ENST00000556445 IGSF9BQ9UPX0 1349 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 CDHR4A6H8M9 788 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 EFCAB8A8MWE9 144 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 TGFB1I1O43294 461 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 SGTAO43765 313 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 STRNO43815 780 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 ATP9AO75110 1047 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 TBX10O75333 385 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 AKAP3O75969 853 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 ACTL6BO94805 426 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 LCA5LO95447 670 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 CCNE2O96020 404 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 RPLP2P05387 115 aaKnown RBP5.28□□□□□ -1.56
SRP54-211ENST00000556445 PRKCBP05771 671 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 CNPP09543 421 aaKnown RBP5.28□□□□□ -1.56
SRP54-211ENST00000556445 FERP16591 822 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 ARL3P36405 182 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 AARSP49588 968 aaKnown RBP eCLIP5.28□□□□□ -1.56
SRP54-211ENST00000556445 SLC26A2P50443 739 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 ARFIP2P53365 341 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 RAD23AP54725 363 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 POLR2FP61218 127 aaKnown RBP5.28□□□□□ -1.56
SRP54-211ENST00000556445 MXRA7P84157 204 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 KLHL30Q0D2K2 578 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 FOXI1Q12951 378 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 ZNF674Q2M3X9 581 aa5.28□□□□□ -1.56
SRP54-211ENST00000556445 TDRD12Q587J7 1177 aaKnown RBP5.28□□□□□ -1.56
SRP54-211ENST00000556445 CCDC122Q5T0U0 273 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms