RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 PTSQ03393 145 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 GALNT3Q14435 633 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 NFATC4Q14934 902 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 ZNF662Q6ZS27 426 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 PID1Q7Z2X4 250 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 KDELC2Q7Z4H8 507 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 CDKL3Q8IVW4 592 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-217ENST00000556203 ZNF567Q8N184 647 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 PELI3Q8N2H9 469 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 SLC25A45Q8N413 288 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 TADA1Q96BN2 335 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 DTD2Q96FN9 168 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 CNDP2Q96KP4 475 aaKnown RBP15.2■□□□□ 0.02
ACTN1-217ENST00000556203 UBP1Q9NZI7 540 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 DNPEPQ9ULA0 475 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 PNMA8BQ9ULN7 279 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-217ENST00000556203 CNOT1A5YKK6 2376 aaKnown RBP15.19■□□□□ 0.02
ACTN1-217ENST00000556203 ANKRD66B4E2M5 251 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 F5H423 210 aaPredicted RBP15.19■□□□□ 0.02
ACTN1-217ENST00000556203 K7ESM1 405 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 PMPCBO75439 489 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 LDOC1O95751 146 aaPredicted RBP15.19■□□□□ 0.02
ACTN1-217ENST00000556203 C1SP09871 688 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 ATXN1LP0C7T5 689 aaKnown RBP15.19■□□□□ 0.02
ACTN1-217ENST00000556203 RBP3P10745 1247 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 ZNF30P17039 623 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 NFKB1P19838 968 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 PPARDQ03181 441 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 CDK18Q07002 472 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 SLC14A2Q15849 920 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 ESRP1Q6NXG1 681 aaKnown RBP15.19■□□□□ 0.02
ACTN1-217ENST00000556203 PNCKQ6P2M8 343 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 DARS2Q6PI48 645 aaKnown RBP15.19■□□□□ 0.02
ACTN1-217ENST00000556203 ENPP7Q6UWV6 458 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 RFLNAQ6ZTI6 216 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 Q6ZVL8 140 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 TECPR1Q7Z6L1 1165 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 PHACTR4Q8IZ21 702 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 RBFAQ8N0V3 343 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 PNPLA1Q8N8W4 532 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 ZNF548Q8NEK5 533 aaPredicted RBP15.19■□□□□ 0.02
ACTN1-217ENST00000556203 FUBP1Q96AE4 644 aaKnown RBP15.19■□□□□ 0.02
ACTN1-217ENST00000556203 ALS2CR12Q96Q35 445 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 TRIB3Q96RU7 358 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 LYSMD1Q96S90 227 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 MLPHQ9BV36 600 aaPredicted RBP15.19■□□□□ 0.02
ACTN1-217ENST00000556203 TCEAL2Q9H3H9 227 aaPredicted RBP15.19■□□□□ 0.02
ACTN1-217ENST00000556203 WDR26Q9H7D7 661 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 TOR4AQ9NXH8 423 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 KCTD5Q9NXV2 234 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 APOBEC3BQ9UH17 382 aaKnown RBP15.19■□□□□ 0.02
ACTN1-217ENST00000556203 CD84Q9UIB8 345 aa15.19■□□□□ 0.02
ACTN1-217ENST00000556203 CACNA1AO00555 2505 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 ANKRD36A6QL64 1941 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 C1orf232A0A0U1RR37 186 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 GOLGA6CA6NDK9 693 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 GOLGA6BA6NDN3 693 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 GOLGA6L9A6NEM1 432 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 CACNB4O00305 520 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-217ENST00000556203 TRIM38O00635 465 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 CLDN7O95471 211 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 GOLGA6DP0CG33 693 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 TRIM23P36406 574 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 STC1P52823 247 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 KIAA1024LP59773 190 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 CDKN3Q16667 212 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 FAXCQ5TGI0 409 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 NYAP1Q6ZVC0 841 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 SLCO6A1Q86UG4 719 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 ATL2Q8NHH9 583 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 LMX1AQ8TE12 382 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 BTN2A2Q8WVV5 523 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 WDR92Q96MX6 357 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 FCRL5Q96RD9 977 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 FERMT1Q9BQL6 677 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 SLC13A1Q9BZW2 595 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 GOLGA6AQ9NYA3 693 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 SPASTQ9UBP0 616 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 KLQ9UEF7 1012 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 FAM153AQ9UHL3 310 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 RSPH14Q9UHP6 348 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 TRHDEQ9UKU6 1024 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 APOBEC2Q9Y235 224 aaKnown RBP15.18■□□□□ 0.02
ACTN1-217ENST00000556203 PPP2R2CQ9Y2T4 447 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 SPTBN2O15020 2390 aa15.18■□□□□ 0.02
ACTN1-217ENST00000556203 CABIN1Q9Y6J0 2220 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 NEMP2A6NFY4 417 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 ENC1O14682 589 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 SCAMP1O15126 338 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 KCNN4O15554 427 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 AQP9O43315 295 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 SIGLEC6O43699 453 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 TRIM16O95361 564 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 NDST3O95803 873 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 TOP3BO95985 862 aaKnown RBP15.17■□□□□ 0.02
ACTN1-217ENST00000556203 GIMD1P0DJR0 217 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 TSHRP16473 764 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 WNT3AP56704 352 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 SRP54P61011 504 aaKnown RBP15.17■□□□□ 0.02
ACTN1-217ENST00000556203 DNAJC3Q13217 504 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms