RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 JAMLQ86YT9 394 aa18.85■□□□□ 0.61
CDKN3-209ENST00000556102 SFTPA2Q8IWL1 248 aa18.85■□□□□ 0.61
CDKN3-209ENST00000556102 NUDCD1Q96RS6 583 aa18.85■□□□□ 0.61
CDKN3-209ENST00000556102 CCNL2Q96S94 520 aaPredicted RBP18.85■□□□□ 0.61
CDKN3-209ENST00000556102 SEMA4CQ9C0C4 833 aa18.85■□□□□ 0.61
CDKN3-209ENST00000556102 DPEP2Q9H4A9 486 aa18.85■□□□□ 0.61
CDKN3-209ENST00000556102 LRIT1Q9P2V4 623 aa18.85■□□□□ 0.61
CDKN3-209ENST00000556102 MYO1AQ9UBC5 1043 aa18.85■□□□□ 0.61
CDKN3-209ENST00000556102 PCDHGC4Q9Y5F7 938 aa18.85■□□□□ 0.61
CDKN3-209ENST00000556102 RNF215Q9Y6U7 377 aa18.85■□□□□ 0.61
CDKN3-209ENST00000556102 TTC24A2A3L6 582 aaPredicted RBP18.84■□□□□ 0.61
CDKN3-209ENST00000556102 NUDT21O43809 227 aaKnown RBP18.84■□□□□ 0.61
CDKN3-209ENST00000556102 ZIC2O95409 532 aaPredicted RBP18.84■□□□□ 0.61
CDKN3-209ENST00000556102 PEX11BO96011 259 aa18.84■□□□□ 0.61
CDKN3-209ENST00000556102 JMJD7P0C870 316 aa18.84■□□□□ 0.61
CDKN3-209ENST00000556102 HGFP14210 728 aa18.84■□□□□ 0.61
CDKN3-209ENST00000556102 AMPD1P23109 780 aa18.84■□□□□ 0.61
CDKN3-209ENST00000556102 NFKBIAP25963 317 aa18.84■□□□□ 0.61
CDKN3-209ENST00000556102 IL1R2P27930 398 aa18.84■□□□□ 0.61
CDKN3-209ENST00000556102 VIPR1P32241 457 aa18.84■□□□□ 0.61
CDKN3-209ENST00000556102 ZFP36L1Q07352 338 aaKnown RBP18.84■□□□□ 0.61
CDKN3-209ENST00000556102 ARHGEF7Q14155 803 aa18.84■□□□□ 0.61
CDKN3-209ENST00000556102 LY6DQ14210 128 aa18.84■□□□□ 0.61
CDKN3-209ENST00000556102 SMTNL2Q2TAL5 461 aa18.84■□□□□ 0.61
CDKN3-209ENST00000556102 BOLA3Q53S33 107 aa18.84■□□□□ 0.61
CDKN3-209ENST00000556102 KIAA1614Q5VZ46 1190 aa18.84■□□□□ 0.61
CDKN3-209ENST00000556102 POLNQ7Z5Q5 900 aa18.84■□□□□ 0.61
CDKN3-209ENST00000556102 BBS5Q8N3I7 341 aa18.84■□□□□ 0.61
CDKN3-209ENST00000556102 CCL4L1Q8NHW4 92 aa18.84■□□□□ 0.61
CDKN3-209ENST00000556102 KIAA1524Q8TCG1 905 aa18.84■□□□□ 0.61
CDKN3-209ENST00000556102 PDCD6IPQ8WUM4 868 aaKnown RBP18.84■□□□□ 0.61
CDKN3-209ENST00000556102 TMEM159Q96B96 161 aa18.84■□□□□ 0.61
CDKN3-209ENST00000556102 MGME1Q9BQP7 344 aa18.84■□□□□ 0.61
CDKN3-209ENST00000556102 PHPT1Q9NRX4 125 aaPredicted RBP18.84■□□□□ 0.61
CDKN3-209ENST00000556102 ETNK2Q9NVF9 386 aa18.84■□□□□ 0.61
CDKN3-209ENST00000556102 LOXL2Q9Y4K0 774 aa18.84■□□□□ 0.61
CDKN3-209ENST00000556102 MAFKO60675 156 aa18.83■□□□□ 0.6
CDKN3-209ENST00000556102 HEXIM1O94992 359 aaKnown RBP18.83■□□□□ 0.6
CDKN3-209ENST00000556102 CCNB1P14635 433 aa18.83■□□□□ 0.6
CDKN3-209ENST00000556102 HEATR4Q86WZ0 1026 aa18.83■□□□□ 0.6
CDKN3-209ENST00000556102 PGBD5Q8N414 524 aa18.83■□□□□ 0.6
CDKN3-209ENST00000556102 GPBAR1Q8TDU6 330 aa18.83■□□□□ 0.6
CDKN3-209ENST00000556102 HSPH1Q92598 858 aa18.83■□□□□ 0.6
CDKN3-209ENST00000556102 DTD2Q96FN9 168 aa18.83■□□□□ 0.6
CDKN3-209ENST00000556102 CSPG4P5Q96PW8 444 aa18.83■□□□□ 0.6
CDKN3-209ENST00000556102 TEX101Q9BY14 249 aa18.83■□□□□ 0.6
CDKN3-209ENST00000556102 ISCUQ9H1K1 167 aa18.83■□□□□ 0.6
CDKN3-209ENST00000556102 CARS2Q9HA77 564 aaKnown RBP18.83■□□□□ 0.6
CDKN3-209ENST00000556102 NOD2Q9HC29 1040 aa18.83■□□□□ 0.6
CDKN3-209ENST00000556102 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.83■□□□□ 0.6
CDKN3-209ENST00000556102 PISDQ9UG56 409 aa18.83■□□□□ 0.6
CDKN3-209ENST00000556102 PHTF1Q9UMS5 762 aa18.83■□□□□ 0.6
CDKN3-209ENST00000556102 PIEZO2Q9H5I5 2752 aa18.83■□□□□ 0.6
CDKN3-209ENST00000556102 FLNBO75369 2602 aaKnown RBP18.82■□□□□ 0.6
CDKN3-209ENST00000556102 A0A1B0GTH6 734 aa18.82■□□□□ 0.6
CDKN3-209ENST00000556102 PSMD11O00231 422 aa18.82■□□□□ 0.6
CDKN3-209ENST00000556102 NVLO15381 856 aaKnown RBP18.82■□□□□ 0.6
CDKN3-209ENST00000556102 CYP2A6P11509 494 aaPredicted RBP18.82■□□□□ 0.6
CDKN3-209ENST00000556102 SKILP12757 684 aa18.82■□□□□ 0.6
CDKN3-209ENST00000556102 TCF4P15884 667 aa18.82■□□□□ 0.6
CDKN3-209ENST00000556102 SERPINB6P35237 376 aa18.82■□□□□ 0.6
CDKN3-209ENST00000556102 TRAF2Q12933 501 aa18.82■□□□□ 0.6
CDKN3-209ENST00000556102 RALGPS1Q5JS13 557 aa18.82■□□□□ 0.6
CDKN3-209ENST00000556102 SLITRK4Q8IW52 837 aa18.82■□□□□ 0.6
CDKN3-209ENST00000556102 CBARPQ8N350 705 aaPredicted RBP18.82■□□□□ 0.6
CDKN3-209ENST00000556102 ATPAF2Q8N5M1 289 aa18.82■□□□□ 0.6
CDKN3-209ENST00000556102 NSMCE1Q8WV22 266 aa18.82■□□□□ 0.6
CDKN3-209ENST00000556102 GSDMCQ9BYG8 508 aa18.82■□□□□ 0.6
CDKN3-209ENST00000556102 FRMD8Q9BZ67 464 aaPredicted RBP18.82■□□□□ 0.6
CDKN3-209ENST00000556102 WDR70Q9NW82 654 aa18.82■□□□□ 0.6
CDKN3-209ENST00000556102 TMEM63CQ9P1W3 806 aa18.82■□□□□ 0.6
CDKN3-209ENST00000556102 CEACAM5P06731 702 aa18.81■□□□□ 0.6
CDKN3-209ENST00000556102 RARAP10276 462 aa18.81■□□□□ 0.6
CDKN3-209ENST00000556102 LIPCP11150 499 aa18.81■□□□□ 0.6
CDKN3-209ENST00000556102 LHCGRP22888 699 aa18.81■□□□□ 0.6
CDKN3-209ENST00000556102 TEAD1P28347 426 aa18.81■□□□□ 0.6
CDKN3-209ENST00000556102 ETV3P41162 512 aa18.81■□□□□ 0.6
CDKN3-209ENST00000556102 CDH6P55285 790 aa18.81■□□□□ 0.6
CDKN3-209ENST00000556102 B4GALNT1Q00973 533 aa18.81■□□□□ 0.6
CDKN3-209ENST00000556102 ILF3Q12906 894 aaKnown RBP eCLIP18.81■□□□□ 0.6
CDKN3-209ENST00000556102 PIGHQ14442 188 aaPredicted RBP18.81■□□□□ 0.6
CDKN3-209ENST00000556102 DENND2CQ68D51 928 aa18.81■□□□□ 0.6
CDKN3-209ENST00000556102 HSD11B1LQ7Z5J1 315 aa18.81■□□□□ 0.6
CDKN3-209ENST00000556102 C17orf82Q86X59 251 aaPredicted RBP18.81■□□□□ 0.6
CDKN3-209ENST00000556102 NRROSQ86YC3 692 aa18.81■□□□□ 0.6
CDKN3-209ENST00000556102 TEKT4Q8WW24 435 aa18.81■□□□□ 0.6
CDKN3-209ENST00000556102 MED8Q96G25 268 aa18.81■□□□□ 0.6
CDKN3-209ENST00000556102 NAP1L5Q96NT1 182 aaPredicted RBP18.81■□□□□ 0.6
CDKN3-209ENST00000556102 CMKLR1Q99788 373 aa18.81■□□□□ 0.6
CDKN3-209ENST00000556102 SUDS3Q9H7L9 328 aaPredicted RBP18.81■□□□□ 0.6
CDKN3-209ENST00000556102 PCDH18Q9HCL0 1135 aa18.81■□□□□ 0.6
CDKN3-209ENST00000556102 SPATS2LQ9NUQ6 558 aaKnown RBP18.81■□□□□ 0.6
CDKN3-209ENST00000556102 TRNAU1APQ9NX07 287 aaKnown RBP18.81■□□□□ 0.6
CDKN3-209ENST00000556102 SETXQ7Z333 2677 aaKnown RBP18.8■□□□□ 0.6
CDKN3-209ENST00000556102 NPIPB15A6NHN6 443 aaPredicted RBP18.8■□□□□ 0.6
CDKN3-209ENST00000556102 J3QKU1 62 aa18.8■□□□□ 0.6
CDKN3-209ENST00000556102 EFSO43281 561 aa18.8■□□□□ 0.6
CDKN3-209ENST00000556102 PGLSO95336 258 aa18.8■□□□□ 0.6
CDKN3-209ENST00000556102 ITIH1P19827 911 aa18.8■□□□□ 0.6
CDKN3-209ENST00000556102 MMP13P45452 471 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms