RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 CSNK1DP48730 415 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 CLCN5P51795 746 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 PLK1P53350 603 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 GPLD1P80108 840 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 TMPRSS15P98073 1019 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 SLC20A2Q08357 652 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 SLC12A1Q13621 1099 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 GRM3Q14832 879 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 CHI3L2Q15782 390 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 SWI5Q1ZZU3 235 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 MPPE1Q53F39 396 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 TMEM240Q5SV17 173 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 RNF219Q5W0B1 726 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-235ENST00000556082 FAM91A1Q658Y4 838 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 TXNDC8Q6A555 127 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 ELMSAN1Q6PJG2 1045 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 GAREM2Q75VX8 874 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 TMC7Q7Z402 723 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 CRLF3Q8IUI8 442 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 DMRTC2Q8IXT2 367 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-235ENST00000556082 ELMOD1Q8N336 334 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.33□□□□□ -1.08
ATXN3-235ENST00000556082 SLC25A41Q8N5S1 370 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 ARL14EPQ8N8R7 260 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-235ENST00000556082 LEMD2Q8NC56 503 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 KREMEN2Q8NCW0 462 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 STYXQ8WUJ0 223 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 ALG14Q96F25 216 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 RMDN2Q96LZ7 410 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 SLC22A12Q96S37 553 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 CYP2S1Q96SQ9 504 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 TUBB6Q9BUF5 446 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 C1QTNF1Q9BXJ1 281 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 ATXN3LQ9H3M9 355 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 STN1Q9H668 368 aaKnown RBP8.33□□□□□ -1.08
ATXN3-235ENST00000556082 KCNK13Q9HB14 408 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 NMRAL1Q9HBL8 299 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 NOD2Q9HC29 1040 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 ALG13Q9NP73 1137 aaKnown RBP8.33□□□□□ -1.08
ATXN3-235ENST00000556082 SAR1AQ9NR31 198 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 ABCF3Q9NUQ8 709 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 IL1RAPL1Q9NZN1 696 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 NYNRINQ9P2P1 1898 aaKnown RBP8.33□□□□□ -1.08
ATXN3-235ENST00000556082 PRKAG2Q9UGJ0 569 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 SLC2A6Q9UGQ3 507 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 ZMYM5Q9UJ78 669 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 LSM7Q9UK45 103 aaKnown RBP8.33□□□□□ -1.08
ATXN3-235ENST00000556082 CORO1CQ9ULV4 474 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-235ENST00000556082 CHKBQ9Y259 395 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 ACOT9Q9Y305 439 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 CPQQ9Y646 472 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 CENPFP49454 3210 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 PCNTO95613 3336 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 E2F8A0AVK6 867 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 C2orf71A6NGG8 1288 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 TMEM114B3SHH9 223 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 TARM1B6A8C7 271 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 ANKRD65E5RJM6 399 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 C5orf67F2Z3F1 127 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 G3V2L1 256 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 TSPAN3O60637 253 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 HNRNPCL1O60812 293 aaKnown RBP8.32□□□□□ -1.08
ATXN3-235ENST00000556082 TBL1XO60907 577 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 UBOX5O94941 541 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 SNUPNO95149 360 aaKnown RBP8.32□□□□□ -1.08
ATXN3-235ENST00000556082 CRTAMO95727 393 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 CD160O95971 181 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 GLUD1P00367 558 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 RB1P06400 928 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 C8AP07357 584 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 POU2F2P09086 479 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 STMN1P16949 149 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 HOXA9P31269 272 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 SLC1A2P43004 574 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 SGSHP51688 502 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 LBX1P52954 281 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 ARFIP2P53365 341 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 ERVFC1P60507 584 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 RAB10P61026 200 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 RPL26P61254 145 aaKnown RBP8.32□□□□□ -1.08
ATXN3-235ENST00000556082 ARF5P84085 180 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 ZXDBP98169 803 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 CTBP1Q13363 440 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 SEPT6Q14141 434 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 USP10Q14694 798 aaKnown RBP8.32□□□□□ -1.08
ATXN3-235ENST00000556082 PCLAFQ15004 111 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 TAF1AQ15573 450 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-235ENST00000556082 SPRED3Q2MJR0 410 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 TSNAXIP1Q2TAA8 658 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 TAF1BQ53T94 588 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-235ENST00000556082 CES4AQ5XG92 561 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 C16orf46Q6P387 395 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 NCEH1Q6PIU2 408 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 IGF2-ASQ6U949 168 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 CMC1Q7Z7K0 106 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 CILP2Q8IUL8 1156 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 DENND6AQ8IWF6 608 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 KIAA1958Q8N8K9 716 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 DCAF4L2Q8NA75 395 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 FIBINQ8TAL6 211 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms