RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 ZNF653Q96CK0 615 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 ZNF641Q96N77 438 aaPredicted RBP6.74□□□□□ -1.33
PSEN1-216ENST00000556066 PEBP4Q96S96 227 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 SYT11Q9BT88 431 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 LRRC19Q9H756 370 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 ATP13A3Q9H7F0 1226 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 PDFQ9HBH1 243 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 NCKIPSDQ9NZQ3 722 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 SCHIP1Q9P0W5 487 aaPredicted RBP6.74□□□□□ -1.33
PSEN1-216ENST00000556066 SIRPGQ9P1W8 387 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 SALL4Q9UJQ4 1053 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 PNMA8BQ9ULN7 279 aaPredicted RBP6.74□□□□□ -1.33
PSEN1-216ENST00000556066 OR1A2Q9Y585 309 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 RAI2Q9Y5P3 530 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 COL27A1Q8IZC6 1860 aaPredicted RBP6.73□□□□□ -1.33
PSEN1-216ENST00000556066 hCG_2014768A0A024R1R8 64 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 TLDC2A0PJX2 215 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 EME2A4GXA9 379 aaPredicted RBP6.73□□□□□ -1.33
PSEN1-216ENST00000556066 TMEM191CA6NGB0 347 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 EIF3CLB5ME19 914 aaKnown RBP6.73□□□□□ -1.33
PSEN1-216ENST00000556066 LMO7DNF2Z398 122 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 MEN1O00255 615 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 DDX3XO00571 662 aaKnown RBP eCLIP6.73□□□□□ -1.331e-9■■□□□ 11.7
PSEN1-216ENST00000556066 CDK2AP1O14519 115 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 TPP1O14773 563 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 YY2O15391 372 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 LRCH4O75427 683 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 RASGRP1O95267 797 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 GPC1P35052 558 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 MMP12P39900 470 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 RNF144AP50876 292 aaPredicted RBP6.73□□□□□ -1.33
PSEN1-216ENST00000556066 SCNN1BP51168 640 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 HK3P52790 923 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 PCBP4P57723 403 aaKnown RBP6.73□□□□□ -1.33
PSEN1-216ENST00000556066 BCL2L1Q07817 233 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 ELOCQ15369 112 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 TLR1Q15399 786 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 ISXQ2M1V0 245 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 ALG11Q2TAA5 492 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 SMTNL2Q2TAL5 461 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 TDRD12Q587J7 1177 aaKnown RBP6.73□□□□□ -1.33
PSEN1-216ENST00000556066 C3orf38Q5JPI3 329 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 PERM1Q5SV97 790 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 CDCP2Q5VXM1 449 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 E4F1Q66K89 784 aaPredicted RBP6.73□□□□□ -1.33
PSEN1-216ENST00000556066 ESRP1Q6NXG1 681 aaKnown RBP6.73□□□□□ -1.33
PSEN1-216ENST00000556066 RBM44Q6ZP01 1051 aaKnown RBP6.73□□□□□ -1.33
PSEN1-216ENST00000556066 ARHGAP36Q6ZRI8 547 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 ZSWIM9Q86XI8 627 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 SPACA3Q8IXA5 215 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 SLC35F3Q8IY50 421 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 LSMEM2Q8N112 164 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 NPWQ8N729 165 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 ZNF248Q8NDW4 579 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 PCDH19Q8TAB3 1148 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 HCAR2Q8TDS4 363 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 PDCD6IPQ8WUM4 868 aaKnown RBP6.73□□□□□ -1.33
PSEN1-216ENST00000556066 SCG3Q8WXD2 468 aaKnown RBP6.73□□□□□ -1.33
PSEN1-216ENST00000556066 HSPH1Q92598 858 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 NAT6Q93015 286 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 ATXN7L3BQ96GX2 97 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 ZNF830Q96NB3 372 aaPredicted RBP6.73□□□□□ -1.33
PSEN1-216ENST00000556066 FCRL3Q96P31 734 aaPredicted RBP6.73□□□□□ -1.33
PSEN1-216ENST00000556066 TUBGCP5Q96RT8 1024 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 INSM2Q96T92 566 aaPredicted RBP6.73□□□□□ -1.33
PSEN1-216ENST00000556066 EIF3CQ99613 913 aaKnown RBP6.73□□□□□ -1.33
PSEN1-216ENST00000556066 BPIFA3Q9BQP9 254 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.73□□□□□ -1.33
PSEN1-216ENST00000556066 APOOQ9BUR5 198 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 BOCQ9BWV1 1114 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 BRINP2Q9C0B6 783 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 CLPBQ9H078 707 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 ZWILCHQ9H900 591 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 POLR1BQ9H9Y6 1135 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 MRPL47Q9HD33 250 aaKnown RBP6.73□□□□□ -1.33
PSEN1-216ENST00000556066 AIPL1Q9NZN9 384 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 CWC15Q9P013 229 aaKnown RBP6.73□□□□□ -1.33
PSEN1-216ENST00000556066 KLQ9UEF7 1012 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 MOSPD1Q9UJG1 213 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 PADI4Q9UM07 663 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 SATB2Q9UPW6 733 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 ATP8A1Q9Y2Q0 1164 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 SCINQ9Y6U3 715 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 ZFC3H1O60293 1989 aaKnown RBP6.73□□□□□ -1.33
PSEN1-216ENST00000556066 ATMQ13315 3056 aa6.73□□□□□ -1.33
PSEN1-216ENST00000556066 TLN1Q9Y490 2541 aaKnown RBP6.72□□□□□ -1.33
PSEN1-216ENST00000556066 A0A1B0GTH6 734 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 A0A1W2PQC6 194 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 TSPAN11A1L157 253 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 TMEM110-MUSTN1A8MSY1 372 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 H3BRJ5 948 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 AGRPO00253 132 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 CACNB4O00305 520 aaPredicted RBP6.72□□□□□ -1.33
PSEN1-216ENST00000556066 TOR1BO14657 336 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 CASC3O15234 703 aaKnown RBP6.72□□□□□ -1.33
PSEN1-216ENST00000556066 PRMT3O60678 531 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 RECQL5O94762 991 aaPredicted RBP6.72□□□□□ -1.33
PSEN1-216ENST00000556066 TNFP01375 233 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 PTMAP06454 111 aaKnown RBP6.72□□□□□ -1.33
PSEN1-216ENST00000556066 ALPIP09923 528 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms