RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 SLC5A9Q2M3M2 681 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 NOMO2Q5JPE7 1267 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 ZNF697Q5TEC3 545 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 MRNIPQ6NTE8 343 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 IYDQ6PHW0 289 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 RBM44Q6ZP01 1051 aaKnown RBP7.01□□□□□ -1.29
TDP1-213ENST00000555880 SAPCD2Q86UD0 394 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 ZNF598Q86UK7 904 aaKnown RBP7.01□□□□□ -1.29
TDP1-213ENST00000555880 SERINC5Q86VE9 423 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 LRRTM3Q86VH5 581 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 MON1AQ86VX9 555 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 DHFR2Q86XF0 187 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 ATP6V0D2Q8N8Y2 350 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 TMEM102Q8N9M5 508 aaPredicted RBP7.01□□□□□ -1.29
TDP1-213ENST00000555880 HDAC10Q969S8 669 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 ATP6V1E2Q96A05 226 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 PPWD1Q96BP3 646 aaKnown RBP7.01□□□□□ -1.29
TDP1-213ENST00000555880 NMD3Q96D46 503 aaKnown RBP7.01□□□□□ -1.29
TDP1-213ENST00000555880 HMCESQ96FZ2 354 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 SUSD3Q96L08 255 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 PRPF18Q99633 342 aaKnown RBP7.01□□□□□ -1.29
TDP1-213ENST00000555880 ERVK-6Q9BXR3 956 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 GRIP2Q9C0E4 1043 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 FBXO44Q9H4M3 255 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 AGO3Q9H9G7 860 aaKnown RBP7.01□□□□□ -1.29
TDP1-213ENST00000555880 SPC25Q9HBM1 224 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 OSER1Q9NX31 292 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 ETAA1Q9NY74 926 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 ABT1Q9ULW3 272 aaKnown RBP7.01□□□□□ -1.29
TDP1-213ENST00000555880 PADI4Q9UM07 663 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 DMTF1Q9Y222 760 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 MTF2Q9Y483 593 aaPredicted RBP7.01□□□□□ -1.29
TDP1-213ENST00000555880 SNX13Q9Y5W8 968 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 SCN10AQ9Y5Y9 1956 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 MROH6A6NGR9 719 aa7□□□□□ -1.29
TDP1-213ENST00000555880 FBP2O00757 339 aa7□□□□□ -1.29
TDP1-213ENST00000555880 TNFRSF10BO14763 440 aa7□□□□□ -1.29
TDP1-213ENST00000555880 ANGPT2O15123 496 aa7□□□□□ -1.29
TDP1-213ENST00000555880 TRIM24O15164 1050 aa7□□□□□ -1.29
TDP1-213ENST00000555880 DUSP11O75319 330 aaKnown RBP7□□□□□ -1.29
TDP1-213ENST00000555880 SLC4A1P02730 911 aa7□□□□□ -1.29
TDP1-213ENST00000555880 CD52P31358 61 aa7□□□□□ -1.29
TDP1-213ENST00000555880 THPOP40225 353 aa7□□□□□ -1.29
TDP1-213ENST00000555880 GCGRP47871 477 aa7□□□□□ -1.29
TDP1-213ENST00000555880 MAXP61244 160 aa7□□□□□ -1.29
TDP1-213ENST00000555880 MYBPC1Q00872 1141 aa7□□□□□ -1.29
TDP1-213ENST00000555880 RALGDSQ12967 914 aa7□□□□□ -1.29
TDP1-213ENST00000555880 PPP1R3AQ16821 1122 aa7□□□□□ -1.29
TDP1-213ENST00000555880 MGAT5BQ3V5L5 792 aa7□□□□□ -1.29
TDP1-213ENST00000555880 NADK2Q4G0N4 442 aa7□□□□□ -1.29
TDP1-213ENST00000555880 SLC39A12Q504Y0 691 aa7□□□□□ -1.29
TDP1-213ENST00000555880 ZNF789Q5FWF6 425 aa7□□□□□ -1.29
TDP1-213ENST00000555880 SIRPB2Q5JXA9 342 aa7□□□□□ -1.29
TDP1-213ENST00000555880 ZNF678Q5SXM1 525 aa7□□□□□ -1.29
TDP1-213ENST00000555880 GPR158Q5T848 1215 aa7□□□□□ -1.29
TDP1-213ENST00000555880 PIK3R6Q5UE93 754 aa7□□□□□ -1.29
TDP1-213ENST00000555880 CLEC6AQ6EIG7 209 aa7□□□□□ -1.29
TDP1-213ENST00000555880 KRT80Q6KB66 452 aa7□□□□□ -1.29
TDP1-213ENST00000555880 GDF6Q6KF10 455 aaPredicted RBP7□□□□□ -1.29
TDP1-213ENST00000555880 ZNF280DQ6N043 979 aa7□□□□□ -1.29
TDP1-213ENST00000555880 PAOXQ6QHF9 649 aa7□□□□□ -1.29
TDP1-213ENST00000555880 LAYNQ6UX15 382 aa7□□□□□ -1.29
TDP1-213ENST00000555880 C17orf99Q6UX52 265 aa7□□□□□ -1.29
TDP1-213ENST00000555880 CXCL17Q6UXB2 119 aa7□□□□□ -1.29
TDP1-213ENST00000555880 SCD5Q86SK9 330 aa7□□□□□ -1.29
TDP1-213ENST00000555880 C14orf80Q86SX3 495 aa7□□□□□ -1.29
TDP1-213ENST00000555880 HERC6Q8IVU3 1022 aa7□□□□□ -1.29
TDP1-213ENST00000555880 DCP1BQ8IZD4 617 aaKnown RBP7□□□□□ -1.29
TDP1-213ENST00000555880 CLYBLQ8N0X4 340 aa7□□□□□ -1.29
TDP1-213ENST00000555880 RYBPQ8N488 228 aaPredicted RBP7□□□□□ -1.29
TDP1-213ENST00000555880 OR13J1Q8NGT2 312 aa7□□□□□ -1.29
TDP1-213ENST00000555880 LPGAT1Q92604 370 aa7□□□□□ -1.29
TDP1-213ENST00000555880 EXT2Q93063 718 aa7□□□□□ -1.29
TDP1-213ENST00000555880 HIC2Q96JB3 615 aa7□□□□□ -1.29
TDP1-213ENST00000555880 MPP4Q96JB8 637 aa7□□□□□ -1.29
TDP1-213ENST00000555880 TMEM209Q96SK2 561 aa7□□□□□ -1.29
TDP1-213ENST00000555880 PCDHAC1Q9H158 963 aa7□□□□□ -1.29
TDP1-213ENST00000555880 GSTO2Q9H4Y5 243 aa7□□□□□ -1.29
TDP1-213ENST00000555880 TMEM248Q9NWD8 314 aa7□□□□□ -1.29
TDP1-213ENST00000555880 ABI2Q9NYB9 513 aaPredicted RBP7□□□□□ -1.29
TDP1-213ENST00000555880 UXTQ9UBK9 157 aaPredicted RBP7□□□□□ -1.29
TDP1-213ENST00000555880 NUDT5Q9UKK9 219 aa7□□□□□ -1.29
TDP1-213ENST00000555880 PADI3Q9ULW8 664 aa7□□□□□ -1.29
TDP1-213ENST00000555880 SCML2Q9UQR0 700 aa7□□□□□ -1.29
TDP1-213ENST00000555880 SLC27A5Q9Y2P5 690 aa7□□□□□ -1.29
TDP1-213ENST00000555880 MRPL42Q9Y6G3 142 aaKnown RBP7□□□□□ -1.29
TDP1-213ENST00000555880 A0A0U1RQF3 1178 aa7□□□□□ -1.29
TDP1-213ENST00000555880 TCRBV3S1A0A5B6 114 aa7□□□□□ -1.29
TDP1-213ENST00000555880 J3KR12 359 aa7□□□□□ -1.29
TDP1-213ENST00000555880 TNFRSF10AO00220 468 aa7□□□□□ -1.29
TDP1-213ENST00000555880 NR5A2O00482 541 aa7□□□□□ -1.29
TDP1-213ENST00000555880 CD3EAPO15446 510 aaKnown RBP7□□□□□ -1.29
TDP1-213ENST00000555880 AKAP10O43572 662 aa7□□□□□ -1.29
TDP1-213ENST00000555880 RAMP2O60895 175 aa7□□□□□ -1.29
TDP1-213ENST00000555880 VPS4BO75351 444 aa7□□□□□ -1.29
TDP1-213ENST00000555880 CRCPO75575 148 aa7□□□□□ -1.29
TDP1-213ENST00000555880 OR6B1O95007 311 aa7□□□□□ -1.29
TDP1-213ENST00000555880 PEX11BO96011 259 aa7□□□□□ -1.29
TDP1-213ENST00000555880 FGF1P05230 155 aa7□□□□□ -1.29
TDP1-213ENST00000555880 HLA-DPA1P20036 260 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms