RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 UBR7Q8N806 425 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 ASCC1Q8N9N2 400 aaKnown RBP10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 ACDQ96AP0 544 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 PPP1R16BQ96T49 567 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 BCL7BQ9BQE9 202 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 NPLQ9BXD5 320 aaPredicted RBP10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 GLRX2Q9NS18 164 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 NRBP2Q9NSY0 501 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 PRPF19Q9UMS4 504 aaKnown RBP10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 MTF2Q9Y483 593 aaPredicted RBP10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 IPPQ9Y573 584 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 LTBP3Q9NS15 1303 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 A0A1B0GTQ1 180 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 USP17L10C9JJH3 530 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 UBXN8O00124 270 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 PIK3R2O00459 728 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 TSPAN4O14817 238 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 AKAP10O43572 662 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 MYCLP12524 364 aaPredicted RBP10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 ENO3P13929 434 aaPredicted RBP10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 MAP4P27816 1152 aaKnown RBP10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 RNF144AP50876 292 aaPredicted RBP10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 AFF1P51825 1210 aaKnown RBP10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 CASP9P55211 416 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 CAP1Q01518 475 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 DBPQ10586 325 aaPredicted RBP10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 PGS1Q32NB8 556 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 PIGGQ5H8A4 983 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 LGSNQ5TDP6 509 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 SCARA3Q6AZY7 606 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 TXNRD3NBQ6F5E7 133 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 PPP1R18Q6NYC8 613 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 BNIPLQ7Z465 357 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 SLC9A9Q8IVB4 645 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 SIX6OS1Q8N1H7 587 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 AVL9Q8NBF6 648 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 KYQ8NBH2 561 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 ZNF420Q8TAQ5 688 aaPredicted RBP10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 LRTOMTQ8WZ04 291 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 SLC4A5Q9BY07 1137 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 ZC4H2Q9NQZ6 224 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 ZNRF3Q9ULT6 936 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 ZNFX1Q9P2E3 1918 aaKnown RBP10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 A8MUA0 341 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 SYN3O14994 580 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 RRP8O43159 456 aaKnown RBP10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 CCNDBP1O95273 360 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 VNN1O95497 513 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 GNAO1P09471 354 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 C7P10643 843 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 OSBPP22059 807 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 DCKP27707 260 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 RAB14P61106 215 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 RACK1P63244 317 aaKnown RBP10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 NFATC3Q12968 1075 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 MAMLD1Q13495 774 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 ZMYND11Q15326 602 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 ASPRV1Q53RT3 343 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 FSCBQ5H9T9 825 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 MBLAC2Q68D91 279 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 SLC9A4Q6AI14 798 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 SEZ6L2Q6UXD5 910 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 SNX29P2Q8IUI4 249 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 ADGRF2Q8IZF7 708 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 ST13P5Q8NFI4 369 aaPredicted RBP10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 FBXW5Q969U6 566 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 C12orf57Q99622 126 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 TDRD1Q9BXT4 1180 aaKnown RBP10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 POLR1BQ9H9Y6 1135 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 MAT2BQ9NZL9 334 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 SNX6Q9UNH7 406 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 B3GNT3Q9Y2A9 372 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 SNX13Q9Y5W8 968 aa10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 DICER1Q9UPY3 1922 aaKnown RBP10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 COL2A1P02458 1487 aaPredicted RBP10.37□□□□□ -0.75
EFCAB11-208ENST00000555872 NRCAMQ92823 1304 aa10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 C12orf71A8MTZ7 269 aa10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 C9IYK1 514 aa10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 FAM86B1E9PN63 330 aa10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 H0YJX3 145 aa10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 PCDH17O14917 1159 aa10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 HTRA2O43464 458 aaPredicted RBP10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 CHMP2AO43633 222 aa10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 KCNH1O95259 989 aa10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 FAM86B2P0C5J1 330 aa10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 OCA2Q04671 838 aa10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 TRIM25Q14258 630 aaKnown RBP10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 MTX3Q5HYI7 312 aa10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 PLA2G4FQ68DD2 849 aa10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 C16orf89Q6UX73 402 aa10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 UNC5AQ6ZN44 842 aa10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 OR52N1Q8NH53 320 aa10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 SLC35B2Q8TB61 432 aa10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 ACTL9Q8TC94 416 aa10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 DLG3Q92796 817 aa10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 DOK1Q99704 481 aa10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 MROQ9BYG7 248 aa10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 FAM126AQ9BYI3 521 aaPredicted RBP10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 ANKRD60Q9BZ19 345 aa10.36□□□□□ -0.75
EFCAB11-208ENST00000555872 TMEM245Q9H330 911 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms