RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 SPAM1P38567 509 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 CXCL12P48061 93 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 EIF3BP55884 814 aaKnown RBP11.21□□□□□ -0.61
SHMT2-220ENST00000555634 CNTN1Q12860 1018 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 CBLBQ13191 982 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 GPS2Q13227 327 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 ITGA9Q13797 1035 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 ACOX1Q15067 660 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 FAM153CQ494X1 144 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 LRRC73Q5JTD7 316 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 TSTD2Q5T7W7 516 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 KIAA0930Q6ICG6 404 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-220ENST00000555634 DENND5AQ6IQ26 1287 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 MRNIPQ6NTE8 343 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 ZNF449Q6P9G9 518 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-220ENST00000555634 C3orf62Q6ZUJ4 267 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 HDXQ7Z353 690 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 LYSMD3Q7Z3D4 306 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 LMNTD2Q8IXW0 634 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 OR6P1Q8NGX9 317 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 OR14C36Q8NHC7 312 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 ARRDC3Q96B67 414 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 MRGPRX1Q96LB2 322 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 PWWP2AQ96N64 755 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 CYTH2Q99418 400 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 BTBD1Q9H0C5 482 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 NINJ2Q9NZG7 142 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 HCN2Q9UL51 889 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 PPIL1Q9Y3C6 166 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 ARL5AQ9Y689 179 aa11.21□□□□□ -0.61
SHMT2-220ENST00000555634 TRPM6Q9BX84 2022 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 CCDC78A2IDD5 438 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 TMEM221A6NGB7 291 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 M0R296 226 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 RIPK2O43353 540 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 NDUFS2O75306 463 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 BANF1O75531 89 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 H2AFXP16104 143 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-220ENST00000555634 GABRG2P18507 467 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 AOC1P19801 751 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 COL9A1P20849 921 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 CLCN5P51795 746 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 ZNF140P52738 457 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-220ENST00000555634 PTPN5P54829 565 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 RPS21P63220 83 aaKnown RBP11.2□□□□□ -0.62
SHMT2-220ENST00000555634 MGAT5Q09328 741 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 FRG1Q14331 258 aaKnown RBP11.2□□□□□ -0.62
SHMT2-220ENST00000555634 FASTKD3Q14CZ7 662 aaKnown RBP11.2□□□□□ -0.62
SHMT2-220ENST00000555634 ANKRD20A4Q4UJ75 823 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 MSS51Q4VC12 460 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 FASTKD1Q53R41 847 aaKnown RBP11.2□□□□□ -0.62
SHMT2-220ENST00000555634 RNF187Q5TA31 235 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-220ENST00000555634 AGBL4Q5VU57 503 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 STEAP4Q687X5 459 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 NEK5Q6P3R8 708 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 FBXO38Q6PIJ6 1188 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 UNC5AQ6ZN44 842 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 SDCCAG8Q86SQ7 713 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-220ENST00000555634 KCNMB4Q86W47 210 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 CTAGE3PQ8IX95 158 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 MPP5Q8N3R9 675 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 AADATQ8N5Z0 425 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 OR4K2Q8NGD2 314 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 NUS1Q96E22 293 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 CERS2Q96G23 380 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 SIGLEC10Q96LC7 697 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 PLEKHG4BQ96PX9 1271 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 HHIPQ96QV1 700 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 WRAP53Q9BUR4 548 aaKnown RBP11.2□□□□□ -0.62
SHMT2-220ENST00000555634 MKRN2Q9H000 416 aaKnown RBP11.2□□□□□ -0.62
SHMT2-220ENST00000555634 STMN4Q9H169 189 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-220ENST00000555634 SGK2Q9HBY8 427 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 CHRAC1Q9NRG0 131 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 C20orf96Q9NUD7 363 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-220ENST00000555634 NLE1Q9NVX2 485 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-220ENST00000555634 SARDHQ9UL12 918 aa11.2□□□□□ -0.62
SHMT2-220ENST00000555634 FNDC3AQ9Y2H6 1198 aaKnown RBP11.2□□□□□ -0.62
SHMT2-220ENST00000555634 MTF2Q9Y483 593 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-220ENST00000555634 GLYATL1P3A0A0U1RQE8 302 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 MROH6A6NGR9 719 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 SHISA7A6NL88 538 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 GOLGA8CPA6NN73 597 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 A8MX80 341 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 WNT9AO14904 365 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 LAMTOR5O43504 91 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 PLRG1O43660 514 aaKnown RBP11.19□□□□□ -0.62
SHMT2-220ENST00000555634 LDB2O43679 373 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 TM7SF2O76062 418 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 VAPBO95292 243 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 PRAMEF1O95521 474 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 PRKCGP05129 697 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 DCNP07585 359 aaKnown RBP11.19□□□□□ -0.62
SHMT2-220ENST00000555634 INHBAP08476 426 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 MYZAPP0CAP1 466 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 TIMP2P16035 220 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 PMLP29590 882 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 ATP5DP30049 168 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 NUDT1P36639 197 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 HSD17B3P37058 310 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms