RNA–Protein interactions for RNA: ENST00000555047.1

APAF1-213, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 5

Gene APAF1, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-213ENST00000555047 SRPRAP08240 638 aaKnown RBP4.41□□□□□ -1.7
APAF1-213ENST00000555047 CLTBP09497 229 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 GABRB1P18505 474 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 NNMTP40261 264 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 ACSM2AQ08AH3 577 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 NAE1Q13564 534 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 IRF3Q14653 427 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 NAB2Q15742 525 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 ASTE1Q2TB18 679 aaPredicted RBP4.41□□□□□ -1.7
APAF1-213ENST00000555047 ZSCAN23Q3MJ62 389 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 WASHC2DQ5SRD0 308 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 MFSD4BQ5TF39 518 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 OTUD1Q5VV17 481 aaPredicted RBP4.41□□□□□ -1.7
APAF1-213ENST00000555047 ACSM2BQ68CK6 577 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 DLK2Q6UY11 383 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 QSOX2Q6ZRP7 698 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 SEPT14Q6ZU15 432 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 MON1BQ7L1V2 547 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 PRPF39Q86UA1 669 aaKnown RBP4.41□□□□□ -1.7
APAF1-213ENST00000555047 NOXA1Q86UR1 476 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 C17orf53Q8N3J3 647 aaPredicted RBP4.41□□□□□ -1.7
APAF1-213ENST00000555047 NANOGP1Q8N7R0 232 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 AGBL3Q8NEM8 1001 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 NLRP4Q96MN2 994 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 SH3GL2Q99962 352 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 MMTAG2Q9BU76 263 aaKnown RBP4.41□□□□□ -1.7
APAF1-213ENST00000555047 C1QTNF5Q9BXJ0 243 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 TKTL2Q9H0I9 626 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 DDX4Q9NQI0 724 aaKnown RBP4.41□□□□□ -1.7
APAF1-213ENST00000555047 OGFRQ9NZT2 677 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 CWC15Q9P013 229 aaKnown RBP4.41□□□□□ -1.7
APAF1-213ENST00000555047 UBA2Q9UBT2 640 aaPredicted RBP4.41□□□□□ -1.7
APAF1-213ENST00000555047 PAM16Q9Y3D7 125 aa4.41□□□□□ -1.7
APAF1-213ENST00000555047 IFNL4K9M1U5 179 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 VWA5AO00534 786 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 JRKO75564 520 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 CSPG5O95196 566 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 PRF1P14222 555 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 AKR1B1P15121 316 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 ITGB6P18564 788 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 SAT1P21673 171 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 HOXC9P31274 260 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 ACSL1P33121 698 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 EIF2DP41214 584 aaKnown RBP4.4□□□□□ -1.71
APAF1-213ENST00000555047 NR4A2P43354 598 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 KCNJ4P48050 445 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 CAMPP49913 170 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 MRPL12P52815 198 aaKnown RBP4.4□□□□□ -1.71
APAF1-213ENST00000555047 PTGR1Q14914 329 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 NTRK2Q16620 822 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 PPP6R3Q5H9R7 873 aaPredicted RBP4.4□□□□□ -1.71
APAF1-213ENST00000555047 METTL2BQ6P1Q9 378 aaKnown RBP4.4□□□□□ -1.71
APAF1-213ENST00000555047 CACNA2D4Q7Z3S7 1137 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 ADGRA1Q86SQ6 560 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 EPHX4Q8IUS5 362 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 C9orf106Q8NAJ2 232 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 C7orf57Q8NEG2 295 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 INPP5DQ92835 1189 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 RRNAD1Q96FB5 475 aaKnown RBP4.4□□□□□ -1.71
APAF1-213ENST00000555047 HMCESQ96FZ2 354 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 METTL2AQ96IZ6 378 aaKnown RBP4.4□□□□□ -1.71
APAF1-213ENST00000555047 WDR26Q9H7D7 661 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 GIMAP4Q9NUV9 329 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 CISD1Q9NZ45 108 aaKnown RBP4.4□□□□□ -1.71
APAF1-213ENST00000555047 FBXL17Q9UF56 701 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 CHORDC1Q9UHD1 332 aaPredicted RBP4.4□□□□□ -1.71
APAF1-213ENST00000555047 RPS6KA6Q9UK32 745 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 STON1Q9Y6Q2 735 aa4.4□□□□□ -1.71
APAF1-213ENST00000555047 LY6G6EA0A0G2JKS1 128 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 A0A1W2PQ09 198 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 SOCS2O14508 198 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 TCERG1O14776 1098 aaKnown RBP4.39□□□□□ -1.71
APAF1-213ENST00000555047 LDB2O43679 373 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 BEST1O76090 585 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 SOX30O94993 753 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 PGM3O95394 542 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 HIST1H2ABP04908 130 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 CYP1A2P05177 515 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 IL7RP16871 459 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 HIST1H2ADP20671 130 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 GCH1P30793 250 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 METAP2P50579 478 aaKnown RBP eCLIP4.39□□□□□ -1.71
APAF1-213ENST00000555047 MRPS34P82930 218 aaKnown RBP4.39□□□□□ -1.71
APAF1-213ENST00000555047 SORDQ00796 357 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 GPR18Q14330 331 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 BECN1Q14457 450 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 C15orf59Q2T9L4 293 aaPredicted RBP4.39□□□□□ -1.71
APAF1-213ENST00000555047 DNTTIP2Q5QJE6 756 aaKnown RBP4.39□□□□□ -1.71
APAF1-213ENST00000555047 GGNBP1Q5YKI7 109 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 PMS2CLQ68D20 193 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 TMCO3Q6UWJ1 677 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 HIST3H2AQ7L7L0 130 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 TRIB2Q92519 343 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 OR2A14Q96R47 310 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 POLDIP3Q9BY77 421 aaKnown RBP4.39□□□□□ -1.71
APAF1-213ENST00000555047 MRPL1Q9BYD6 325 aaKnown RBP4.39□□□□□ -1.71
APAF1-213ENST00000555047 LTB4R2Q9NPC1 389 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 MKKSQ9NPJ1 570 aaPredicted RBP4.39□□□□□ -1.71
APAF1-213ENST00000555047 POT1Q9NUX5 634 aa4.39□□□□□ -1.71
APAF1-213ENST00000555047 TMEM51Q9NW97 253 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms