RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 A8MUI8 341 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 FCHO1O14526 889 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 GYG2O15488 501 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 SNAP91O60641 907 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 RAMP2O60895 175 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 AP2A1O95782 977 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 MGAT1P26572 445 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 NPY2RP49146 381 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 SLC12A1Q13621 1099 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 BMP8AQ7Z5Y6 402 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 HDAC11Q96DB2 347 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 CIPCQ9C0C6 399 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 MUC3BQ9H195 1237 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.45■□□□□ 0.38
SHOX-204ENST00000554971 VPS28Q9UK41 221 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 WASH3PC4AMC7 463 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 GSC2O15499 205 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 ZMPSTE24O75844 475 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 PSMB4P28070 264 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 TIE1P35590 1138 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 EIF4HQ15056 248 aaKnown RBP17.45■□□□□ 0.38
SHOX-204ENST00000554971 ZNF783Q6ZMS7 281 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 WDR75Q8IWA0 830 aaKnown RBP17.45■□□□□ 0.38
SHOX-204ENST00000554971 CCDC117Q8IWD4 279 aaPredicted RBP17.45■□□□□ 0.38
SHOX-204ENST00000554971 TMEM105Q8N8V8 129 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 IL17RCQ8NAC3 791 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 WFIKKN2Q8TEU8 576 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 USP33Q8TEY7 942 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 NSMCE1Q8WV22 266 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 HMCESQ96FZ2 354 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 MRGPRX3Q96LB0 322 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 ACE2Q9BYF1 805 aaPredicted RBP17.45■□□□□ 0.38
SHOX-204ENST00000554971 ARL8BQ9NVJ2 186 aa17.45■□□□□ 0.38
SHOX-204ENST00000554971 FAM237BA0A1B0GVD1 139 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 ADAM23O75077 832 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 PEX11AO75192 247 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 USP1O94782 785 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 CD160O95971 181 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 MT-CO1P00395 513 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 ITGA2BP08514 1039 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 GCKP35557 465 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 HADHAP40939 763 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 STK19P49842 368 aaPredicted RBP17.44■□□□□ 0.38
SHOX-204ENST00000554971 SESN2P58004 480 aaPredicted RBP17.44■□□□□ 0.38
SHOX-204ENST00000554971 POLD3Q15054 466 aaPredicted RBP17.44■□□□□ 0.38
SHOX-204ENST00000554971 CCDC153Q494R4 210 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 FBXO43Q4G163 708 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 CMPK2Q5EBM0 449 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 DGKKQ5KSL6 1271 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 TMEM135Q86UB9 458 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 CCDC33Q8N5R6 958 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 ZNF513Q8N8E2 541 aaPredicted RBP17.44■□□□□ 0.38
SHOX-204ENST00000554971 RPLP0P6Q8NHW5 317 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 LRRN4Q8WUT4 740 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 RPL10LQ96L21 214 aaKnown RBP17.44■□□□□ 0.38
SHOX-204ENST00000554971 CADM1Q9BY67 442 aaKnown RBP17.44■□□□□ 0.38
SHOX-204ENST00000554971 SLC39A8Q9C0K1 460 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 MAGEH1Q9H213 219 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 ZFATQ9P243 1243 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 KLHL8Q9P2G9 620 aaPredicted RBP17.44■□□□□ 0.38
SHOX-204ENST00000554971 VPS51Q9UID3 782 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 ACTL7AQ9Y615 435 aa17.44■□□□□ 0.38
SHOX-204ENST00000554971 CAPN14A8MX76 684 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 MAGEC1O60732 1142 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 SERPINA6P08185 405 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 GNAZP19086 355 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 POLR2EP19388 210 aaKnown RBP17.43■□□□□ 0.38
SHOX-204ENST00000554971 PTPN3P26045 913 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 SPRP35270 261 aaPredicted RBP17.43■□□□□ 0.38
SHOX-204ENST00000554971 RPS9P46781 194 aaKnown RBP17.43■□□□□ 0.38
SHOX-204ENST00000554971 CLCN5P51795 746 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 ARF5P84085 180 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 PDE1BQ01064 536 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 GALNT2Q10471 571 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 DMC1Q14565 340 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 ARHGAP36Q6ZRI8 547 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 TMPRSS6Q8IU80 811 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 DCAF4L2Q8NA75 395 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 PPP1R14CQ8TAE6 165 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 CERS2Q96G23 380 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 PPP1R2P1Q96PQ5 205 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 NUDCD1Q96RS6 583 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 MYCBPQ99417 103 aaPredicted RBP17.43■□□□□ 0.38
SHOX-204ENST00000554971 CHRDQ9H2X0 955 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 CASS4Q9NQ75 786 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 THAP10Q9P2Z0 257 aaPredicted RBP17.43■□□□□ 0.38
SHOX-204ENST00000554971 PLIN3O60664 434 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 ALDOAP04075 364 aaKnown RBP17.43■□□□□ 0.38
SHOX-204ENST00000554971 HNRNPLP14866 589 aaKnown RBP eCLIP17.43■□□□□ 0.38
SHOX-204ENST00000554971 IL12RB1P42701 662 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 MAGEA12P43365 314 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 NDST2P52849 883 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 OXCT1P55809 520 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 ENPP2Q13822 863 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 LRRC32Q14392 662 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 ZNF234Q14588 700 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 FASTKD1Q53R41 847 aaKnown RBP17.43■□□□□ 0.38
SHOX-204ENST00000554971 SYNPOQ8N3V7 929 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 FBXL6Q8N531 539 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 MCUR1Q96AQ8 359 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms