RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 TMEM18Q96B42 140 aa3.21□□□□□ -1.9
SCFD1-213ENST00000554776 FAM149B1Q96BN6 582 aa3.21□□□□□ -1.9
SCFD1-213ENST00000554776 RNF183Q96D59 192 aa3.21□□□□□ -1.9
SCFD1-213ENST00000554776 ELMOD3Q96FG2 381 aa3.21□□□□□ -1.9
SCFD1-213ENST00000554776 C1orf74Q96LT6 269 aa3.21□□□□□ -1.9
SCFD1-213ENST00000554776 SERINC2Q96SA4 455 aa3.21□□□□□ -1.9
SCFD1-213ENST00000554776 MSTO1Q9BUK6 570 aa3.21□□□□□ -1.9
SCFD1-213ENST00000554776 SF3B5Q9BWJ5 86 aaKnown RBP3.21□□□□□ -1.9
SCFD1-213ENST00000554776 C1QTNF5Q9BXJ0 243 aa3.21□□□□□ -1.9
SCFD1-213ENST00000554776 MAK16Q9BXY0 300 aaKnown RBP3.21□□□□□ -1.9
SCFD1-213ENST00000554776 NPFFR1Q9GZQ6 430 aa3.21□□□□□ -1.9
SCFD1-213ENST00000554776 HIPK2Q9H2X6 1198 aa3.21□□□□□ -1.9
SCFD1-213ENST00000554776 CATSPERBQ9H7T0 1116 aa3.21□□□□□ -1.9
SCFD1-213ENST00000554776 MAGEE1Q9HCI5 957 aa3.21□□□□□ -1.9
SCFD1-213ENST00000554776 BPIFA1Q9NP55 256 aa3.21□□□□□ -1.9
SCFD1-213ENST00000554776 PLSCR4Q9NRQ2 329 aa3.21□□□□□ -1.9
SCFD1-213ENST00000554776 ABI3Q9P2A4 366 aa3.21□□□□□ -1.9
SCFD1-213ENST00000554776 NDRG3Q9UGV2 375 aa3.21□□□□□ -1.9
SCFD1-213ENST00000554776 ZNF580Q9UK33 172 aa3.21□□□□□ -1.9
SCFD1-213ENST00000554776 NENFQ9UMX5 172 aa3.21□□□□□ -1.9
SCFD1-213ENST00000554776 AAR2Q9Y312 384 aaKnown RBP3.21□□□□□ -1.9
SCFD1-213ENST00000554776 INSL5Q9Y5Q6 135 aa3.21□□□□□ -1.9
SCFD1-213ENST00000554776 A3GALT2U3KPV4 340 aa3.21□□□□□ -1.9
SCFD1-213ENST00000554776 TTC36A6NLP5 189 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 INAFM1C9JVW0 142 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 MS4A18H0YCH9 400 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 H3BQ06 376 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-213ENST00000554776 KLK8O60259 260 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 PGM3O95394 542 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 DNTTP04053 509 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 CYP1A2P05177 515 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 RB1P06400 928 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 CBSLP0DN79 551 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 ETFAP13804 333 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 CDAP32320 146 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 CBSP35520 551 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 EIF2DP41214 584 aaKnown RBP3.2□□□□□ -1.9
SCFD1-213ENST00000554776 ENTPD1P49961 510 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 PMS2P54278 862 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 FAM27E3Q08E93 113 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 NIPAL4Q0D2K0 466 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 Q0VFX4 171 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 LRMPQ12912 555 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 GPS2Q13227 327 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 HNF4GQ14541 408 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 DRAP1Q14919 205 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-213ENST00000554776 ZSCAN23Q3MJ62 389 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 PLEKHO1Q53GL0 409 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-213ENST00000554776 SGO1Q5FBB7 561 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 CXorf66Q5JRM2 361 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-213ENST00000554776 GSTA5Q7RTV2 222 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 ZNF367Q7RTV3 350 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 SLC35F3Q8IY50 421 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 ADGRF2Q8IZF7 708 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 PRR26Q8N8Z3 221 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 POMGNT1Q8WZA1 660 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 ZNF479Q96JC4 524 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 MAP7D2Q96T17 732 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 SLF1Q9BQI6 1058 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 TMEM204Q9BSN7 226 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 CDT1Q9H211 546 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 WDR26Q9H7D7 661 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 SLC28A3Q9HAS3 691 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 RANGRFQ9HD47 186 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-213ENST00000554776 PDE7BQ9NP56 450 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 DDX4Q9NQI0 724 aaKnown RBP3.2□□□□□ -1.9
SCFD1-213ENST00000554776 ASAH2Q9NR71 780 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 DLGAP2Q9P1A6 1054 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 R3HDM2Q9Y2K5 976 aaKnown RBP3.2□□□□□ -1.9
SCFD1-213ENST00000554776 TTLL3Q9Y4R7 772 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 SNX8Q9Y5X2 465 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 CEPT1Q9Y6K0 416 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 EVPLQ92817 2033 aa3.2□□□□□ -1.9
SCFD1-213ENST00000554776 A0A0U1RQF3 1178 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 A0A1B0GVT2 93 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 C1orf226A1L170 272 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 ERAL1O75616 437 aaKnown RBP3.19□□□□□ -1.9
SCFD1-213ENST00000554776 TSPAN9O75954 239 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 IPO7O95373 1038 aaKnown RBP3.19□□□□□ -1.9
SCFD1-213ENST00000554776 NGFRP08138 427 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 T-ENOLP0DO92 83 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 PCNAP12004 261 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 GABRB1P18505 474 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 HOXA11P31270 313 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-213ENST00000554776 PIGAP37287 484 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 PSMB10P40306 273 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 ABATP80404 500 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 STK4Q13043 487 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 OLIG2Q13516 323 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 LPIN1Q14693 890 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 C2orf68Q2NKX9 166 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 BMP2KLQ5H9B9 411 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 RAB41Q5JT25 222 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 DNTTIP2Q5QJE6 756 aaKnown RBP3.19□□□□□ -1.9
SCFD1-213ENST00000554776 OTUD1Q5VV17 481 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-213ENST00000554776 ARMC3Q5W041 872 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 RUSC1-AS1Q66K80 236 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 PDXDC1Q6P996 788 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 TMEM154Q6P9G4 183 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 PATL1Q86TB9 770 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms