RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 LRCH4O75427 683 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 C4BPAP04003 597 aaKnown RBP13.97□□□□□ -0.17
VTI1B-204ENST00000554659 LYNP07948 512 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 LLGL2Q6P1M3 1020 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 ZC3H7AQ8IWR0 971 aaKnown RBP13.97□□□□□ -0.17
VTI1B-204ENST00000554659 PARP8Q8N3A8 854 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 PANX1Q96RD7 426 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 CPXM1Q96SM3 734 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 CRISPLD1Q9H336 500 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 ZDHHC6Q9H6R6 413 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 ATP13A3Q9H7F0 1226 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 MYOM1P52179 1685 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 PSIP1O75475 530 aaKnown RBP13.97□□□□□ -0.17
VTI1B-204ENST00000554659 TIPRLO75663 272 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 SPIDRQ14159 915 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 CERCAMQ5T4B2 595 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 PIGWQ7Z7B1 504 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 TRAPPC5Q8IUR0 188 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 PLD5Q8N7P1 536 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 LEMD2Q8NC56 503 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 OR52L1Q8NGH7 329 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 LINGO1Q96FE5 620 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 OR52E6Q96RD3 313 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 PDGFDQ9GZP0 370 aaPredicted RBP13.97□□□□□ -0.17
VTI1B-204ENST00000554659 GALNT8Q9NY28 637 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 PTGFRNQ9P2B2 879 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 A8MX80 341 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 RFXANKO14593 260 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 IPO13O94829 963 aaKnown RBP13.97□□□□□ -0.17
VTI1B-204ENST00000554659 SMIM10L2AP0DMW4 78 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 SMIM10L2BP0DMW5 78 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 SP100P23497 879 aaPredicted RBP13.97□□□□□ -0.17
VTI1B-204ENST00000554659 STARP49675 285 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 EVX2Q03828 476 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 KCTD19Q17RG1 926 aaPredicted RBP13.97□□□□□ -0.17
VTI1B-204ENST00000554659 TIGD2Q4W5G0 525 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 TEX44Q53QW1 395 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 PGBD2Q6P3X8 592 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 RNF19BQ6ZMZ0 732 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 ZNF554Q86TJ5 538 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 FAM35AQ86V20 835 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 OR2T12Q8NG77 320 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 AP3S1Q92572 193 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 FAM210AQ96ND0 272 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 BTBD9Q96Q07 612 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 PNPLA8Q9NP80 782 aa13.97□□□□□ -0.17
VTI1B-204ENST00000554659 FAM155BO75949 473 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 ANXA8L1Q5VT79 327 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 C9orf131Q5VYM1 1079 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 BHLHB9Q6PI77 547 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 MRPL45Q9BRJ2 306 aaKnown RBP13.96□□□□□ -0.17
VTI1B-204ENST00000554659 FAIM2Q9BWQ8 316 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 RMI1Q9H9A7 625 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 RNF19AQ9NV58 838 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 RAPGEFL1Q9UHV5 662 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 PSME2Q9UL46 239 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 ZNF232Q9UNY5 417 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 GNEQ9Y223 722 aaKnown RBP13.96□□□□□ -0.17
VTI1B-204ENST00000554659 SLC9A8Q9Y2E8 581 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 RPTORQ8N122 1335 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 PLOD3O60568 738 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 PPP1R11O60927 126 aaPredicted RBP13.96□□□□□ -0.17
VTI1B-204ENST00000554659 POLR2EP19388 210 aaKnown RBP13.96□□□□□ -0.17
VTI1B-204ENST00000554659 ADSLP30566 484 aaPredicted RBP13.96□□□□□ -0.17
VTI1B-204ENST00000554659 CCR4P51679 360 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 UGT2B15P54855 530 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 RNF220Q5VTB9 566 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 R3HCC1LQ7Z5L2 792 aaKnown RBP13.96□□□□□ -0.17
VTI1B-204ENST00000554659 ARL10Q8N8L6 244 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 SLC4A9Q96Q91 983 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 HSD3B7Q9H2F3 369 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 IKZF4Q9H2S9 585 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 SAMD4AQ9UPU9 718 aaKnown RBP13.96□□□□□ -0.17
VTI1B-204ENST00000554659 KPNA3O00505 521 aaPredicted RBP13.96□□□□□ -0.17
VTI1B-204ENST00000554659 UGT2B11O75310 529 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 CILPO75339 1184 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 FTH1P02794 183 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 ENO2P09104 434 aaPredicted RBP13.96□□□□□ -0.17
VTI1B-204ENST00000554659 CWF19L1Q69YN2 538 aaKnown RBP13.96□□□□□ -0.17
VTI1B-204ENST00000554659 DRICH1Q6PGQ1 229 aaPredicted RBP13.96□□□□□ -0.17
VTI1B-204ENST00000554659 CAMKK1Q8N5S9 505 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 CPSF7Q8N684 471 aaKnown RBP13.96□□□□□ -0.17
VTI1B-204ENST00000554659 SPOCK2Q92563 424 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 CLPTM1LQ96KA5 538 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 COQ6Q9Y2Z9 468 aa13.96□□□□□ -0.17
VTI1B-204ENST00000554659 C2orf71A6NGG8 1288 aa13.96□□□□□ -0.18
VTI1B-204ENST00000554659 TEX28O15482 410 aa13.96□□□□□ -0.18
VTI1B-204ENST00000554659 SEMA3DO95025 777 aa13.96□□□□□ -0.18
VTI1B-204ENST00000554659 MRPS6P82932 125 aaKnown RBP13.96□□□□□ -0.18
VTI1B-204ENST00000554659 LPIN1Q14693 890 aa13.96□□□□□ -0.18
VTI1B-204ENST00000554659 ZYG11AQ6WRX3 759 aa13.96□□□□□ -0.18
VTI1B-204ENST00000554659 PAGE2Q7Z2X7 111 aa13.96□□□□□ -0.18
VTI1B-204ENST00000554659 GLIS2Q9BZE0 524 aaPredicted RBP13.96□□□□□ -0.18
VTI1B-204ENST00000554659 SDCBP2Q9H190 292 aa13.96□□□□□ -0.18
VTI1B-204ENST00000554659 BPIFA1Q9NP55 256 aa13.96□□□□□ -0.18
VTI1B-204ENST00000554659 PCDH12Q9NPG4 1184 aa13.96□□□□□ -0.18
VTI1B-204ENST00000554659 FETUBQ9UGM5 382 aa13.96□□□□□ -0.18
VTI1B-204ENST00000554659 DHX15O43143 795 aaKnown RBP13.96□□□□□ -0.18
VTI1B-204ENST00000554659 HLA-DQA2P01906 255 aa13.96□□□□□ -0.18
VTI1B-204ENST00000554659 CDH13P55290 713 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms