RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 ZNF549Q6P9A3 640 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 IFNL1Q8IU54 200 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 FAM110BQ8TC76 370 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 ASB9Q96DX5 294 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 C19orf60Q96EN9 201 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 VPS45Q9NRW7 570 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 SRP72O76094 671 aaKnown RBP15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 GFAPP14136 432 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 STX1BP61266 288 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 SH3BP2P78314 561 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 MAPRE2Q15555 327 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 MAP7D1Q3KQU3 841 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 VARS2Q5ST30 1063 aaKnown RBP15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 CHSY3Q70JA7 882 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 LRRC49Q8IUZ0 686 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 ZNF683Q8IZ20 524 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 TRPC4APQ8TEL6 797 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 DLG3Q92796 817 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 FAM193BQ96PV7 902 aaPredicted RBP15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 UNC93B1Q9H1C4 597 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 AKTIPQ9H8T0 292 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 TSR3Q9UJK0 312 aaKnown RBP15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 MROH6A6NGR9 719 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 ZNF839A8K0R7 811 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 NRP2O60462 931 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 ALDOCP09972 364 aaKnown RBP15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 SMIM18P0DKX4 95 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 HSPA1AP0DMV8 641 aaKnown RBP15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 HSPA1BP0DMV9 641 aaKnown RBP15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 FLT3LGP49771 235 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 OR4D1Q15615 310 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 CYHR1Q6ZMK1 362 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 RTN4RL1Q86UN2 441 aaPredicted RBP15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 MFN1Q8IWA4 741 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 ARHGAP18Q8N392 663 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 MARVELD2Q8N4S9 558 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 ADCY4Q8NFM4 1077 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 GIPC2Q8TF65 315 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 SPON2Q9BUD6 331 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 FBXO44Q9H4M3 255 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 CCSER2Q9H7U1 834 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 ZFYVE28Q9HCC9 887 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 SPAG4Q9NPE6 437 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 CROTQ9UKG9 612 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 A0A0D9SEW6 157 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 A0A1B0GTW7 788 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 MANSC4A6NHS7 340 aaPredicted RBP15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 WASH4PA8MWX3 477 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 CLPTM1O96005 669 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 FAM171A1Q5VUB5 890 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 MSANTD2Q6P1R3 559 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 TMEM102Q8N9M5 508 aaPredicted RBP15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 NAT14Q8WUY8 206 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 BTN2A3PQ96KV6 586 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 CYP2S1Q96SQ9 504 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 COQ10BQ9H8M1 238 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 PCDHB5Q9Y5E4 795 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 ANKRD12Q6UB98 2062 aa15.69■□□□□ 0.1
ARHGEF40-203ENST00000554514 ARHGEF37A1IGU5 675 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 H3BMM5 538 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 KIF3CO14782 793 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 PIP5K1BO14986 540 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 DENRO43583 198 aaKnown RBP15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 LINC00032P0C843 101 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 CD1DP15813 335 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 FMO4P31512 558 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 PBX3P40426 434 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 KCNQ1P51787 676 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 MYBPC1Q00872 1141 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 ECT2LQ008S8 904 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 CAPRIN1Q14444 709 aaKnown RBP15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 GRB7Q14451 532 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 VPS26BQ4G0F5 336 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 MTX3Q5HYI7 312 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 FAM45BPQ6NSW5 357 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 HERC6Q8IVU3 1022 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 FAM45AQ8TCE6 357 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 RANBP9Q96S59 729 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 CIB1Q99828 191 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 POLR1EQ9GZS1 481 aaKnown RBP15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 HCSTQ9UBK5 93 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 FNDC1Q4ZHG4 1894 aaPredicted RBP15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 SUPT3HB4E1H0 165 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 SUPT3HO75486 399 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 ELNP15502 786 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 HERVK_113P63132 956 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 RBM44Q6ZP01 1051 aaKnown RBP15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 ZNF598Q86UK7 904 aaKnown RBP15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 CATSPER1Q8NEC5 780 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 DIS3LQ8TF46 1054 aaKnown RBP15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 SLC25A23Q9BV35 468 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 ERVK-6Q9BXR3 956 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 NOL11Q9H8H0 719 aaKnown RBP15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 SEMA4BQ9NPR2 832 aaPredicted RBP15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 UTP6Q9NYH9 597 aaKnown RBP15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 RAB26Q9ULW5 256 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 DNAJC15Q9Y5T4 150 aa15.68■□□□□ 0.1
ARHGEF40-203ENST00000554514 A0A0U1RQS6 177 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 A0A1B0GTL3 188 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms