RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 HAND2P61296 217 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 BLOC1S1P78537 153 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 COG7P83436 770 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 OCRLQ01968 901 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 GFPT1Q06210 699 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-227ENST00000554491 LRMPQ12912 555 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 RALGDSQ12967 914 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 STK4Q13043 487 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 PRKG2Q13237 762 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 CUL4AQ13619 759 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 TRIM14Q14142 442 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 NCF4Q15080 339 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 PDCD1Q15116 288 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 LRRC41Q15345 812 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 CYTH1Q15438 398 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 CNPY1Q3B7I2 92 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 FBXO48Q5FWF7 155 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 ANKRD20A2Q5SQ80 823 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 HECTD3Q5T447 861 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 ATXN7L2Q5T6C5 722 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-227ENST00000554491 ANKRD20A1Q5TYW2 823 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 ANKRD20A3Q5VUR7 823 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 PAPD7Q5XG87 772 aaKnown RBP4.49□□□□□ -1.69
ATXN3-227ENST00000554491 B3GNTL1Q67FW5 361 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-227ENST00000554491 C11orf88Q6PI97 169 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 CYP4V2Q6ZWL3 525 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-227ENST00000554491 TRPM8Q7Z2W7 1104 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 ADCK1Q86TW2 530 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 LONP2Q86WA8 852 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 P3H2Q8IVL5 708 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 SLC38A6Q8IZM9 456 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 BBS5Q8N3I7 341 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 CERS5Q8N5B7 392 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 ENAHQ8N8S7 591 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-227ENST00000554491 DNAAF3Q8N9W5 541 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 ZNF680Q8NEM1 530 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 IL17RDQ8NFM7 739 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 OR8K3Q8NH51 312 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 LILRB4Q8NHJ6 448 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 FANK1Q8TC84 345 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 DDI1Q8WTU0 396 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 ZNF480Q8WV37 535 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 AFG1LQ8WV93 481 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 RASSF5Q8WWW0 418 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 RRP36Q96EU6 259 aaKnown RBP4.49□□□□□ -1.69
ATXN3-227ENST00000554491 Q96MF0 132 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 OPALINQ96PE5 141 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 PPP1R10Q96QC0 940 aaKnown RBP4.49□□□□□ -1.69
ATXN3-227ENST00000554491 VPS35Q96QK1 796 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 ZSWIM1Q9BR11 485 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 CARD6Q9BX69 1037 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 SPATA16Q9BXB7 569 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 IMPG2Q9BZV3 1241 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 LRRC19Q9H756 370 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 TUFT1Q9NNX1 390 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 RASSF1Q9NS23 344 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 KLHL11Q9NVR0 708 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 HAUS2Q9NVX0 235 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 EXTL2Q9UBQ6 330 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 ATP6V1HQ9UI12 483 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 BAG5Q9UL15 447 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 SLC8A2Q9UPR5 921 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 APOBEC2Q9Y235 224 aaKnown RBP4.49□□□□□ -1.69
ATXN3-227ENST00000554491 PLAAQ9Y263 795 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 CACNG2Q9Y698 323 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 ATAD5Q96QE3 1844 aa4.49□□□□□ -1.69
ATXN3-227ENST00000554491 GRIN2DO15399 1336 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 MYH13Q9UKX3 1938 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 COL4A4P53420 1690 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 BRWD1Q9NSI6 2320 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 CYP3A7-CYP3A51PA0A087WV96 503 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 LOC100653049A0A140TA62 436 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 FAM237AA0A1B0GTK4 181 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 CCDC78A2IDD5 438 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 TYW5A2RUC4 315 aaKnown RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 CCDC69A6NI79 296 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 TRIM75PA6NK02 468 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 ACOD1A6NK06 481 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 C16orf96A6NNT2 1141 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 CXorf49A8MYA2 514 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 SMIM22K7EJ46 135 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 L7N2F9 121 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 SLC22A1O15245 554 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 ALOX15BO15296 676 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 GATCO43716 136 aaKnown RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 N4BP1O75113 896 aaKnown RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 KRT34O76011 436 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 GNA14O95837 355 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 SCGB1D2O95969 90 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 CHEK2O96017 543 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 ASS1P00966 412 aaKnown RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 HEXBP07686 556 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 GSPT1P15170 499 aaKnown RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 CYP3A7P24462 503 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 KLRK1P26718 216 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 CRHR1P34998 444 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 PTPN7P35236 360 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 PPARGP37231 505 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 PPP1R2P41236 205 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 GSSP48637 474 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms