RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 SEL1L3Q68CR1 1132 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 PPP1R18Q6NYC8 613 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 KIAA1324Q6UXG2 1013 aaKnown RBP9.56□□□□□ -0.88
SIX4-202ENST00000554079 SH3BP5LQ7L8J4 393 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 THAP5Q7Z6K1 395 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 ZBTB33Q86T24 672 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 AMIGO1Q86WK6 493 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 UNC5BQ8IZJ1 945 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 SMG8Q8ND04 991 aaKnown RBP9.56□□□□□ -0.88
SIX4-202ENST00000554079 CHDHQ8NE62 594 aaPredicted RBP9.56□□□□□ -0.88
SIX4-202ENST00000554079 FEZF2Q8TBJ5 459 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 AGR3Q8TD06 166 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 TRPM4Q8TD43 1214 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 MAGEE2Q8TD90 523 aaPredicted RBP9.56□□□□□ -0.88
SIX4-202ENST00000554079 FBXW5Q969U6 566 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 TESCQ96BS2 214 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 PPP1R36Q96LQ0 422 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 MYRFLQ96LU7 910 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 UROC1Q96N76 676 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 PHOX2BQ99453 314 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 STRA6Q9BX79 667 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 MCCC2Q9HCC0 563 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 HPS4Q9NQG7 708 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 CHRAC1Q9NRG0 131 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 DCAF16Q9NXF7 216 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.56□□□□□ -0.88
SIX4-202ENST00000554079 IP6K2Q9UHH9 426 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 AURKCQ9UQB9 309 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 ATF5Q9Y2D1 282 aaPredicted RBP9.56□□□□□ -0.88
SIX4-202ENST00000554079 ABCA3Q99758 1704 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 CITO14578 2027 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 TSPAN4O14817 238 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 TPST1O60507 370 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 APOA1P02647 267 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 CYP2C8P10632 490 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 ZNF250P15622 560 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 TFE3P19532 575 aaPredicted RBP9.56□□□□□ -0.88
SIX4-202ENST00000554079 CD9P21926 228 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 OXTRP30559 389 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 RFC2P35250 354 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 GMPRP36959 345 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 MAGEA11P43364 429 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 GNPDA1P46926 289 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 DEFA1P59665 94 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 DEFA3P59666 94 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 NKX3-2P78367 333 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 BNC1Q01954 994 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 PSMD5Q16401 504 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 TAF12Q16514 161 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 GLRA4Q5JXX5 417 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 C12orf60Q5U649 245 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 TTBK2Q6IQ55 1244 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 LAIR2Q6ISS4 152 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 FAM45BPQ6NSW5 357 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 ZNF517Q6ZMY9 492 aaPredicted RBP9.56□□□□□ -0.88
SIX4-202ENST00000554079 DBX2Q6ZNG2 339 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 NIPA1Q7RTP0 329 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 TBC1D21Q8IYX1 336 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 PARP16Q8N5Y8 322 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 FAM45AQ8TCE6 357 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 DEPDC1BQ8WUY9 529 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 RPRD1AQ96P16 312 aaPredicted RBP9.56□□□□□ -0.88
SIX4-202ENST00000554079 TBCBQ99426 244 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 WACQ9BTA9 647 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 BDH2Q9BUT1 245 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 TRAF4Q9BUZ4 470 aaPredicted RBP9.56□□□□□ -0.88
SIX4-202ENST00000554079 UCK2Q9BZX2 261 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 ING2Q9H160 280 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 ACAD9Q9H845 621 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 POLR3BQ9NW08 1133 aaPredicted RBP9.56□□□□□ -0.88
SIX4-202ENST00000554079 BTG4Q9NY30 223 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 MRPL39Q9NYK5 338 aaKnown RBP9.56□□□□□ -0.88
SIX4-202ENST00000554079 ENOPH1Q9UHY7 261 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 TMPRSS11EQ9UL52 423 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 TMCC3Q9ULS5 477 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 MAFFQ9ULX9 164 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 SNX6Q9UNH7 406 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 CDYLQ9Y232 598 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 IPPQ9Y573 584 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 CYP3A7-CYP3A51PA0A087WV96 503 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 TTC24A2A3L6 582 aaPredicted RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 CCDC78A2IDD5 438 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 G3V2L1 256 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 SOCS7O14512 581 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 PPM1BO75688 479 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 CHRNGP07510 517 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 HOXD4P09016 255 aaPredicted RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 ITGA2P17301 1181 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 DDCP20711 480 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 IL10P22301 178 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 CYP3A7P24462 503 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 ERP29P30040 261 aaKnown RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 SHMT1P34896 483 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 GP5P40197 560 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 PRIM2P49643 509 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 PTPN5P54829 565 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 MCCD1P59942 119 aaPredicted RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 NOMO3P69849 1222 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 S100A12P80511 92 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 ZNF45Q02386 682 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms