RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 SUDS3Q9H7L9 328 aaPredicted RBP14.21□□□□□ -0.13
CHMP1A-210ENST00000551981 SPATS2LQ9NUQ6 558 aaKnown RBP14.21□□□□□ -0.13
CHMP1A-210ENST00000551981 TRNAU1APQ9NX07 287 aaKnown RBP14.21□□□□□ -0.13
CHMP1A-210ENST00000551981 KCTD5Q9NXV2 234 aa14.21□□□□□ -0.13
CHMP1A-210ENST00000551981 TAAR2Q9P1P5 351 aa14.21□□□□□ -0.13
CHMP1A-210ENST00000551981 ANKMY1Q9P2S6 941 aa14.21□□□□□ -0.13
CHMP1A-210ENST00000551981 RELNP78509 3460 aa14.21□□□□□ -0.14
CHMP1A-210ENST00000551981 ZFC3H1O60293 1989 aaKnown RBP14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 TEX15Q9BXT5 2789 aa14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 ZNF891A8MT65 544 aaPredicted RBP14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 CAPN5O15484 640 aaPredicted RBP14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 ECEL1O95672 775 aa14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 FGF1P05230 155 aa14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 FGF3P11487 239 aaPredicted RBP14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 LIFP15018 202 aa14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 NFKBIAP25963 317 aa14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 RGRP47804 291 aa14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 PAPOLAP51003 745 aaKnown RBP14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 LIMK2P53671 638 aa14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 POLR2FP61218 127 aaKnown RBP14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 UBE2HP62256 183 aa14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 NSUN2Q08J23 767 aaKnown RBP eCLIP14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 UBAP2LQ14157 1087 aaKnown RBP14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 RFTN1Q14699 578 aaPredicted RBP14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 TCP11X2Q5H9J9 407 aa14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 PHF13Q86YI8 300 aaPredicted RBP14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 CACNA2D3Q8IZS8 1091 aa14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 OR4D9Q8NGE8 314 aa14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 NUS1Q96E22 293 aa14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 CELF6Q96J87 481 aaKnown RBP14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 CNPY3Q9BT09 278 aa14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 ZMYND15Q9H091 742 aa14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 EPN3Q9H201 632 aa14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 SP110Q9HB58 689 aa14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 NBASA2RRP1 2371 aa14.2□□□□□ -0.14
CHMP1A-210ENST00000551981 A8MX80 341 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 TPM2P07951 284 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 CD1CP29017 333 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 UGT1A3P35503 534 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 GNPDA1P46926 289 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 RENBPP51606 427 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 JAM2P57087 298 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 RAB15P59190 212 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 AP1S1P61966 158 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 CLEC16AQ2KHT3 1053 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 DPCR1Q3MIW9 517 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 DCAF12Q5T6F0 453 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 SLC30A9Q6PML9 568 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 HEATR4Q86WZ0 1026 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 NRROSQ86YC3 692 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 ART4Q93070 314 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 MCEEQ96PE7 176 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 PCDHB18PQ96TA0 734 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 TEX101Q9BY14 249 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 NLRC4Q9NPP4 1024 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 FAM207AQ9NSI2 230 aaPredicted RBP14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 SEPT11Q9NVA2 429 aaKnown RBP14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 SLC39A1Q9NY26 324 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 B4GALT6Q9UBX8 382 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 ANAPC2Q9UJX6 822 aa14.19□□□□□ -0.14
CHMP1A-210ENST00000551981 USP9YO00507 2555 aaPredicted RBP14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 A0A1W2PQ67 120 aa14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 B4E171 279 aa14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 EIF3CLB5ME19 914 aaKnown RBP14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 EEF2KO00418 725 aaKnown RBP14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 DAPK3O43293 454 aa14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 CEACAM5P06731 702 aa14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 GM2AP17900 193 aa14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 CASRP41180 1078 aa14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 TSPAN7P41732 249 aa14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 SCNN1BP51168 640 aa14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 SQSTM1Q13501 440 aa14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 SKIDA1Q1XH10 827 aa14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 DCUN1D2Q6PH85 259 aa14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 FAM129CQ86XR2 697 aa14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 PELI3Q8N2H9 469 aa14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 PMEPA1Q969W9 287 aa14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 KIAA1143Q96AT1 154 aaPredicted RBP14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 COQ10AQ96MF6 247 aa14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 TEFMQ96QE5 360 aaKnown RBP14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 EIF3CQ99613 913 aaKnown RBP14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 SLC39A8Q9C0K1 460 aa14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 VPS16Q9H269 839 aa14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 SAMSN1Q9NSI8 373 aaKnown RBP14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 KCNK4Q9NYG8 393 aa14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 TAB2Q9NYJ8 693 aa14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 SUFUQ9UMX1 484 aa14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 B3GALT1Q9Y5Z6 326 aa14.18□□□□□ -0.14
CHMP1A-210ENST00000551981 DFFAO00273 331 aa14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 TRAFD1O14545 582 aaPredicted RBP14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 RAD1O60671 282 aa14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 THRAP10827 490 aa14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 GP1BBP13224 206 aa14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 AK4P27144 223 aaPredicted RBP14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 MAN1A1P33908 653 aa14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 PPM1FP49593 454 aaPredicted RBP14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 ARSDP51689 593 aa14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 RPL7AP62424 266 aaKnown RBP14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 GPLD1P80108 840 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms