RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 MMP8P22894 467 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 XPAP23025 273 aaPredicted RBP6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 AK4P27144 223 aaPredicted RBP6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 ARSDP51689 593 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 HK3P52790 923 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 SNRPD1P62314 119 aaKnown RBP6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 RHDQ02161 417 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 SLC20A2Q08357 652 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 SERINC3Q13530 473 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 C16orf72Q14CZ0 275 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 LRRC14Q15048 493 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 KRT31Q15323 416 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 ARL13BQ3SXY8 428 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 TCP11X2Q5H9J9 407 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 HIST2H2BCQ6DN03 193 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 FIGNL1Q6PIW4 674 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 DOK6Q6PKX4 331 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 MACC1Q6ZN28 852 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 TAF8Q7Z7C8 310 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 TRIM74Q86UV6 250 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 DCP2Q8IU60 420 aaKnown RBP6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 CACTIN-AS1Q8N1I8 211 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 ARFGAP1Q8N6T3 406 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 FAM46DQ8NEK8 389 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 WDR36Q8NI36 951 aaKnown RBP6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 GTPBP3Q969Y2 492 aaKnown RBP6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 GDAP1L1Q96MZ0 367 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 MCEEQ96PE7 176 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 CCNL2Q96S94 520 aaPredicted RBP6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 PEBP4Q96S96 227 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 NCAPGQ9BPX3 1015 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 NUDT22Q9BRQ3 303 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 STK33Q9BYT3 514 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 EDEM3Q9BZQ6 932 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 SLC39A8Q9C0K1 460 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 LRRN3Q9H3W5 708 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 CLSTN2Q9H4D0 955 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 CYP4F12Q9HCS2 524 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 SPATS2LQ9NUQ6 558 aaKnown RBP6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 PPARGC1AQ9UBK2 798 aaKnown RBP6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 KLQ9UEF7 1012 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 PCSK1NQ9UHG2 260 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 SALL4Q9UJQ4 1053 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 TPX2Q9ULW0 747 aaKnown RBP6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 LOXL2Q9Y4K0 774 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 PCDHGC4Q9Y5F7 938 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 CSNK1G3Q9Y6M4 447 aa6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 ARHGEF17Q96PE2 2063 aaPredicted RBP6.88□□□□□ -1.31
PRPF40B-214ENST00000551320 NBPF19A0A087WUL8 3843 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 GOLGA6CA6NDK9 693 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 GOLGA6BA6NDN3 693 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 C9orf172C9J069 976 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 DFFAO00273 331 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 TPP1O14773 563 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 ARHGAP6O43182 974 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 FZD6O60353 706 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 RECQL5O94762 991 aaPredicted RBP6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 GOLGA6DP0CG33 693 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 KRT3P12035 628 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 TCF4P15884 667 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 ITGB6P18564 788 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 GPD1P21695 349 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 ALDH4A1P30038 563 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 SOX5P35711 763 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 PAPOLAP51003 745 aaKnown RBP6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 INHBCP55103 352 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 BPIFB4P59827 614 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 CDR2Q01850 454 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 CCDC15Q0P6D6 951 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 RALGDSQ12967 914 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 BECN1Q14457 450 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 NFATC4Q14934 902 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 SYCP1Q15431 976 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 IGFBP7Q16270 282 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 TBR1Q16650 682 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 SKIDA1Q1XH10 827 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 CLEC16AQ2KHT3 1053 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 TMEM52BQ4KMG9 183 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 SNAP47Q5SQN1 464 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 ATP1A1-AS1Q5TC04 95 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 ESRP1Q6NXG1 681 aaKnown RBP6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 ZNF574Q6ZN55 896 aaPredicted RBP6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 SLFN11Q7Z7L1 901 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 CLEC14AQ86T13 490 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 NRROSQ86YC3 692 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 ZDHHC17Q8IUH5 632 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 CCNJLQ8IV13 435 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 UNC5BQ8IZJ1 945 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 LSMEM2Q8N112 164 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 ARL14Q8N4G2 192 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 NPWQ8N729 165 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 PAF1Q8N7H5 531 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 ARL10Q8N8L6 244 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 RTL3Q8N8U3 475 aaKnown RBP6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 MLKLQ8NB16 471 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 PDCD6IPQ8WUM4 868 aaKnown RBP6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 CENPIQ92674 756 aaPredicted RBP6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 ISG20Q96AZ6 181 aaKnown RBP6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 MED8Q96G25 268 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 ABHD17AQ96GS6 310 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms