RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 HAPLN3Q96S86 360 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 MYADMQ96S97 322 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 CYP2S1Q96SQ9 504 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 DDX50Q9BQ39 737 aaKnown RBP5.91□□□□□ -1.46
SCAF11-213ENST00000550629 TRIM7Q9C029 511 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 SEMA4AQ9H3S1 761 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 RETREG1Q9H6L5 497 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 WDCPQ9H6R7 721 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 ZFP14Q9HCL3 533 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 LZTFL1Q9NQ48 299 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 ARHGEF38Q9NXL2 777 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 CFAP97Q9P2B7 532 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 IGSF9Q9P2J2 1179 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 TBC1D14Q9P2M4 693 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 RASAL2Q9UJF2 1139 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 VWA7Q9Y334 891 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 TESMINQ9Y4I5 508 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 CPQQ9Y646 472 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 SLC30A1Q9Y6M5 507 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 DENND4AQ7Z401 1863 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 MYO7AQ13402 2215 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 XIRP2A4UGR9 3374 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 FAM170AA1A519 330 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 MACROD2A1Z1Q3 448 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 GRID2IPA4D2P6 1211 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 ZNF487B1APH4 448 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 LOC730098B7Z3J9 87 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 LEFTY2O00292 366 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 MDM4O15151 490 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 MSI1O43347 362 aaKnown RBP5.9□□□□□ -1.46
SCAF11-213ENST00000550629 PSTPIP1O43586 416 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 SPOPO43791 374 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 KIF5CO60282 957 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 KLKB1P03952 638 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 TUBB4AP04350 444 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 PSMC3P17980 439 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 COMTP21964 271 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 MIPP30301 263 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 CORO1AP31146 461 aaKnown RBP5.9□□□□□ -1.46
SCAF11-213ENST00000550629 CHKAP35790 457 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 ACVRL1P37023 503 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 RPS19P39019 145 aaKnown RBP5.9□□□□□ -1.46
SCAF11-213ENST00000550629 HCAR3P49019 387 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 NAP1L1P55209 391 aaKnown RBP5.9□□□□□ -1.46
SCAF11-213ENST00000550629 PITX1P78337 314 aaPredicted RBP5.9□□□□□ -1.46
SCAF11-213ENST00000550629 SLC25A11Q02978 314 aaKnown RBP5.9□□□□□ -1.46
SCAF11-213ENST00000550629 HTR4Q13639 388 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 MESDQ14696 234 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 PDGFRLQ15198 375 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 ZNF77Q15935 545 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 C15orf59Q2T9L4 293 aaPredicted RBP5.9□□□□□ -1.46
SCAF11-213ENST00000550629 SPDYAQ5MJ70 313 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 MPP7Q5T2T1 576 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 Q6ZSN1 163 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 MFSD6LQ8IWD5 586 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 ADHFE1Q8IWW8 467 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 RHOT1Q8IXI2 618 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 CPXM2Q8N436 756 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 ARFGAP1Q8N6T3 406 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 ATP6V0D2Q8N8Y2 350 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 OR5AN1Q8NGI8 311 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 BPIFB1Q8TDL5 484 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 CHTF18Q8WVB6 975 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 CD101Q93033 1021 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 ADOQ96SZ5 270 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 MENTQ9BUN1 341 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 ZNF747Q9BV97 191 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 PRDM16Q9HAZ2 1276 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 TRPV5Q9NQA5 729 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 DDX56Q9NY93 547 aaKnown RBP5.9□□□□□ -1.46
SCAF11-213ENST00000550629 KCMF1Q9P0J7 381 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 CALCOCO1Q9P1Z2 691 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 RCOR3Q9P2K3 495 aaPredicted RBP5.9□□□□□ -1.46
SCAF11-213ENST00000550629 TRIM10Q9UDY6 481 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 CDH22Q9UJ99 828 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 AGO1Q9UL18 857 aaKnown RBP5.9□□□□□ -1.46
SCAF11-213ENST00000550629 PYCARDQ9ULZ3 195 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 USP18Q9UMW8 372 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 GUCA1BQ9UMX6 200 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 CCL26Q9Y258 94 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.9□□□□□ -1.46
SCAF11-213ENST00000550629 SH3BP1Q9Y3L3 701 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 ALG6Q9Y672 507 aa5.9□□□□□ -1.46
SCAF11-213ENST00000550629 MYO16Q9Y6X6 1858 aa5.9□□□□□ -1.47
SCAF11-213ENST00000550629 C2CD4DB7Z1M9 353 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 CHADO15335 359 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 BUB1O43683 1085 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 ACSL4O60488 711 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 PALMO75781 387 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 MOCS3O95396 460 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 CTNNA2P26232 953 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 CTNNA1P35221 906 aaKnown RBP5.89□□□□□ -1.47
SCAF11-213ENST00000550629 VIPR2P41587 438 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 ZXDBP98169 803 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 TFF2Q03403 129 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 FOXL1Q12952 345 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 PDK2Q15119 407 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 DPYSL2Q16555 572 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 CDO1Q16878 200 aa5.89□□□□□ -1.47
SCAF11-213ENST00000550629 C5orf22Q49AR2 442 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms