RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 TP53I13Q8NBR0 393 aaPredicted RBP13.05□□□□□ -0.32
RAB5C-206ENST00000550406 MCUQ8NE86 351 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 ASB12Q8WXK4 309 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 FOXJ1Q92949 421 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 CENPTQ96BT3 561 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 LRRC45Q96CN5 670 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 HINFPQ9BQA5 517 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 IRF2BPLQ9H1B7 796 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 MBNL1Q9NR56 388 aaKnown RBP13.05□□□□□ -0.32
RAB5C-206ENST00000550406 ASIC3Q9UHC3 531 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 PILRBQ9UKJ0 227 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 TPX2Q9ULW0 747 aaKnown RBP13.05□□□□□ -0.32
RAB5C-206ENST00000550406 SNX24Q9Y343 169 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 KCTD3Q9Y597 815 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 CTAGE15A4D2H0 777 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 MEI4A8MW99 385 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 PSMD11O00231 422 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 LDB2O43679 373 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 LZTS3O60299 673 aaPredicted RBP13.04□□□□□ -0.32
RAB5C-206ENST00000550406 RECQL5O94762 991 aaPredicted RBP13.04□□□□□ -0.32
RAB5C-206ENST00000550406 CTAGE8P0CG41 777 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 ZNF30P17039 623 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 NFKBIAP25963 317 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 ETV3P41162 512 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 CDK16Q00536 496 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 ARHGEF7Q14155 803 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 ACOX1Q15067 660 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 ELF2Q15723 593 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 WSCD2Q2TBF2 565 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 PEAR1Q5VY43 1037 aaPredicted RBP13.04□□□□□ -0.32
RAB5C-206ENST00000550406 IZUMO3Q5VZ72 239 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 LYSMD4Q5XG99 296 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 DUPD1Q68J44 220 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 LRRC8BQ6P9F7 803 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 KDM7AQ6ZMT4 941 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 MICALCLQ6ZW33 695 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 MAATS1Q7Z4T9 603 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 LINC00523Q86TU6 105 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 CTAGE6Q86UF2 777 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 CTAGE4Q8IX94 777 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 CEP112Q8N8E3 955 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 TMEM145Q8NBT3 493 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 MNS1Q8NEH6 495 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 BRSK1Q8TDC3 778 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 BLOC1S5Q8TDH9 187 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 SNX19Q92543 992 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 DTD2Q96FN9 168 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 BMFQ96LC9 184 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 LENG8Q96PV6 779 aaPredicted RBP13.04□□□□□ -0.32
RAB5C-206ENST00000550406 ERP44Q9BS26 406 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 TRIM31Q9BZY9 425 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 ABCG8Q9H221 673 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 ZFYVE1Q9HBF4 777 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 IL17CQ9P0M4 197 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 SMG5Q9UPR3 1016 aaKnown RBP13.04□□□□□ -0.32
RAB5C-206ENST00000550406 HCN4Q9Y3Q4 1203 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 ARL5AQ9Y689 179 aa13.04□□□□□ -0.32
RAB5C-206ENST00000550406 ATXN2Q99700 1313 aaKnown RBP13.04□□□□□ -0.32
RAB5C-206ENST00000550406 PCDH15Q96QU1 1955 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 A0A1W2PR77 199 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 EFCAB8A8MWE9 144 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 GOLGA8MH3BSY2 632 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 BUD23O43709 281 aaKnown RBP13.03□□□□□ -0.32
RAB5C-206ENST00000550406 AVILO75366 819 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 EPN2O95208 641 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 WNT1P04628 370 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 SPINT3P49223 89 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 CLDN2P57739 230 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 SLC7A5Q01650 507 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 CDH17Q12864 832 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 MTM1Q13496 603 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 SETMARQ53H47 684 aaPredicted RBP13.03□□□□□ -0.32
RAB5C-206ENST00000550406 DNTTIP2Q5QJE6 756 aaKnown RBP13.03□□□□□ -0.32
RAB5C-206ENST00000550406 HIBCHQ6NVY1 386 aaPredicted RBP13.03□□□□□ -0.32
RAB5C-206ENST00000550406 PPP1R21Q6ZMI0 780 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 CYP2U1Q7Z449 544 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 PPIL6Q8IXY8 311 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 RGL4Q8IZJ4 473 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 AGGF1Q8N302 714 aaeCLIP13.03□□□□□ -0.32
RAB5C-206ENST00000550406 PLA2G15Q8NCC3 412 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 GPR26Q8NDV2 337 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 CCHCR1Q8TD31 782 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 FUBP1Q96AE4 644 aaKnown RBP13.03□□□□□ -0.32
RAB5C-206ENST00000550406 LOXL4Q96JB6 756 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 PWWP2AQ96N64 755 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 SLC6A18Q96N87 628 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 AGAP2Q99490 1192 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 MYOCQ99972 504 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 GPR63Q9BZJ6 419 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 DPH5Q9H2P9 285 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 TRABDQ9H4I3 376 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 BPIFA1Q9NP55 256 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 GRHL1Q9NZI5 618 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 HACD3Q9P035 362 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 DMGDHQ9UI17 866 aaKnown RBP13.03□□□□□ -0.32
RAB5C-206ENST00000550406 CD84Q9UIB8 345 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 DMTF1Q9Y222 760 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 MUC6Q6W4X9 2439 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 LRP4O75096 1905 aa13.03□□□□□ -0.32
RAB5C-206ENST00000550406 DMDP11532 3685 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms