RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 APOOQ9BUR5 198 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 STRADBQ9C0K7 418 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 ATP13A3Q9H7F0 1226 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 PCDH12Q9NPG4 1184 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 SEPT11Q9NVA2 429 aaKnown RBP7.67□□□□□ -1.18
NEK3-201ENST00000550331 MAP10Q9P2G4 905 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 KLQ9UEF7 1012 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 LIMA1Q9UHB6 759 aaKnown RBP7.67□□□□□ -1.18
NEK3-201ENST00000550331 ACSL6Q9UKU0 697 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 ATP8A1Q9Y2Q0 1164 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 PCDHGA7Q9Y5G6 932 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 TEX15Q9BXT5 2789 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 BOD1L1Q8NFC6 3051 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 TLN1Q9Y490 2541 aaKnown RBP7.67□□□□□ -1.18
NEK3-201ENST00000550331 FLNCQ14315 2725 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 SPTAN1Q13813 2472 aaKnown RBP7.66□□□□□ -1.18
NEK3-201ENST00000550331 PMS2P1A4D2B8 440 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 ARHGAP42A6NI28 874 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 LRRC10BA6NIK2 292 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 D6RAR5 112 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 J3KR12 359 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 TNFRSF10CO14798 259 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 HOXC4P09017 264 aaPredicted RBP7.66□□□□□ -1.18
NEK3-201ENST00000550331 PNLIPP16233 465 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 FERP16591 822 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 MX2P20592 715 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 KELP23276 732 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 KIAA1024LP59773 190 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 RELBQ01201 579 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 MYL5Q02045 173 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 OGDHQ02218 1023 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 UBXN1Q04323 297 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 CLN3Q13286 438 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 DOC2BQ14184 412 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 AFMIDQ63HM1 303 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 ACAD10Q6JQN1 1059 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 DCUN1D2Q6PH85 259 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 CCDC81Q6ZN84 652 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 CLEC17AQ6ZS10 378 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 CAMK1DQ8IU85 385 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 MCOLN2Q8IZK6 566 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 NETO2Q8NC67 525 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 TSACCQ96A04 125 aaPredicted RBP7.66□□□□□ -1.18
NEK3-201ENST00000550331 CCDC74AQ96AQ1 378 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 TMEM159Q96B96 161 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 ECHDC3Q96DC8 303 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 PDXPQ96GD0 296 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 TMEM74Q96NL1 305 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 GFM1Q96RP9 751 aaKnown RBP7.66□□□□□ -1.18
NEK3-201ENST00000550331 SLC39A8Q9C0K1 460 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 SYNDIG1Q9H7V2 258 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 LMBRD1Q9NUN5 540 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 PARVAQ9NVD7 372 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 SIRPGQ9P1W8 387 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 GULP1Q9UBP9 304 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 APPL1Q9UKG1 709 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 ATXN7L1Q9ULK2 861 aaPredicted RBP7.66□□□□□ -1.18
NEK3-201ENST00000550331 GPR34Q9UPC5 381 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 AP4E1Q9UPM8 1137 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 COQ6Q9Y2Z9 468 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 OR1A2Q9Y585 309 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 LRRK2Q5S007 2527 aa7.66□□□□□ -1.18
NEK3-201ENST00000550331 A0A1W2PQM1 296 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 CACNB4O00305 520 aaPredicted RBP7.65□□□□□ -1.18
NEK3-201ENST00000550331 CASC3O15234 703 aaKnown RBP7.65□□□□□ -1.18
NEK3-201ENST00000550331 BUB1BO60566 1050 aaPredicted RBP7.65□□□□□ -1.18
NEK3-201ENST00000550331 PALMO75781 387 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 RECQL5O94762 991 aaPredicted RBP7.65□□□□□ -1.18
NEK3-201ENST00000550331 TNFP01375 233 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 PCCBP05166 539 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 RPLP0P05388 317 aaKnown RBP7.65□□□□□ -1.18
NEK3-201ENST00000550331 GLB1P16278 677 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 UGT1A5P35504 534 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 CHRNA4P43681 627 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 RGRP47804 291 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 ZNF135P52742 658 aaPredicted RBP7.65□□□□□ -1.18
NEK3-201ENST00000550331 INHBCP55103 352 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 AP1S1P61966 158 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 POLR2LP62875 67 aaKnown RBP7.65□□□□□ -1.18
NEK3-201ENST00000550331 CCL7P80098 99 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 IL10RBQ08334 325 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 NSUN2Q08J23 767 aaKnown RBP eCLIP7.65□□□□□ -1.18
NEK3-201ENST00000550331 RALGDSQ12967 914 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 MAMLD1Q13495 774 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 CERCAMQ5T4B2 595 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 ERMARDQ5T6L9 678 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 PLEKHA7Q6IQ23 1121 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 OGFOD3Q6PK18 319 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 RFX8Q6ZV50 586 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 RAB11FIP2Q7L804 512 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 APTXQ7Z2E3 356 aaKnown RBP7.65□□□□□ -1.18
NEK3-201ENST00000550331 RD3Q7Z3Z2 195 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 B3GNT8Q7Z7M8 397 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 SRLQ86TD4 932 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 ZSWIM9Q86XI8 627 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 CCNJLQ8IV13 435 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 PSTKQ8IV42 348 aaKnown RBP7.65□□□□□ -1.18
NEK3-201ENST00000550331 COL27A1Q8IZC6 1860 aaPredicted RBP7.65□□□□□ -1.18
NEK3-201ENST00000550331 FBXO39Q8N4B4 442 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 LZTR1Q8N653 840 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms