RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 ALDH4A1P30038 563 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 MAPKAPK2P49137 400 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 LIG3P49916 1009 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 RAD51Q06609 339 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 ELP6Q0PNE2 266 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 MTM1Q13496 603 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 RAB6CQ53S08 254 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 C2CD6Q53TS8 623 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 MANEALQ5VSG8 457 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 FIGNL1Q6PIW4 674 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 BNIPLQ7Z465 357 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 SLC47A2Q86VL8 602 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 NLRP14Q86W24 1093 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 XYLT1Q86Y38 959 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 GPBAR1Q8TDU6 330 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 ART4Q93070 314 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 FUBP1Q96AE4 644 aaKnown RBP10.54□□□□□ -0.72
VPS29-208ENST00000550267 MIB2Q96AX9 1013 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 HMCESQ96FZ2 354 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 FAM81BQ96LP2 452 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 CATSPER2Q96P56 530 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 SPENQ96T58 3664 aaKnown RBP10.54□□□□□ -0.72
VPS29-208ENST00000550267 MAGEB5Q9BZ81 275 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 RAB6CQ9H0N0 254 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 MAGEH1Q9H213 219 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 PCDH12Q9NPG4 1184 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 APEX2Q9UBZ4 518 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 MAN1B1Q9UKM7 699 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 CTNND2Q9UQB3 1225 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 PCDHGA3Q9Y5H0 932 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 TEX15Q9BXT5 2789 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 RHPN2P1A8MT19 583 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 FAM72CH0Y354 149 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 CACNB4O00305 520 aaPredicted RBP10.53□□□□□ -0.72
VPS29-208ENST00000550267 HGSO14964 777 aaPredicted RBP10.53□□□□□ -0.72
VPS29-208ENST00000550267 MTSS1O43312 755 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 BUB1O43683 1085 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 KDELR3O43731 214 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 RAMP2O60895 175 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 GNA14O95837 355 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 PRKCGP05129 697 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 PRKAR1AP10644 381 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 CD1CP29017 333 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 SCNN1AP37088 669 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 PPP1R2P41236 205 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 GABRB2P47870 512 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 KIAA1024LP59773 190 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 RHOAP61586 193 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 FAM72AQ5TYM5 149 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 FAM72DQ6L9T8 149 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 FAM72BQ86X60 149 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 ZNF354CQ86Y25 554 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 C18orf8Q96DM3 657 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 EXOC2Q96KP1 924 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 KLC2Q9H0B6 622 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 ETNK1Q9HBU6 452 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 CYP4F12Q9HCS2 524 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 SPATS2LQ9NUQ6 558 aaKnown RBP10.53□□□□□ -0.72
VPS29-208ENST00000550267 TMEM248Q9NWD8 314 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 OR12D3Q9UGF7 316 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 MOSPD1Q9UJG1 213 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 NEU3Q9UQ49 428 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 MFHAS1Q9Y4C4 1052 aa10.53□□□□□ -0.72
VPS29-208ENST00000550267 TLN1Q9Y490 2541 aaKnown RBP10.52□□□□□ -0.72
VPS29-208ENST00000550267 SDK2Q58EX2 2172 aa10.52□□□□□ -0.72
VPS29-208ENST00000550267 BICDL2A1A5D9 508 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 PRR19A6NJB7 356 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 FOXN3O00409 490 aaPredicted RBP10.52□□□□□ -0.73
VPS29-208ENST00000550267 FGF1P05230 155 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 BMP6P22004 513 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 MPSTP25325 297 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 OAS2P29728 719 aaKnown RBP10.52□□□□□ -0.73
VPS29-208ENST00000550267 CD97P48960 835 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 SUOXP51687 545 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 LIMK2P53671 638 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 ATP11AP98196 1134 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 NRG1Q02297 640 aaPredicted RBP10.52□□□□□ -0.73
VPS29-208ENST00000550267 CDC20Q12834 499 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 UGP2Q16851 508 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 CDO1Q16878 200 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 LACTB2Q53H82 288 aaPredicted RBP10.52□□□□□ -0.73
VPS29-208ENST00000550267 NKAIN2Q5VXU1 208 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 ERAP2Q6P179 960 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 ZNF438Q7Z4V0 828 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 ATCAYQ86WG3 371 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 C17orf82Q86X59 251 aaPredicted RBP10.52□□□□□ -0.73
VPS29-208ENST00000550267 ZSWIM9Q86XI8 627 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 Q8N3U1 123 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 EMC1Q8N766 993 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 TMEM35BQ8NCS4 154 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 KIAA1524Q8TCG1 905 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 ZDHHC1Q8WTX9 485 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 SLC45A3Q96JT2 553 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 NCAPGQ9BPX3 1015 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 DDA1Q9BW61 102 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 LGR4Q9BXB1 951 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 PDCL3Q9H2J4 239 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 SUDS3Q9H7L9 328 aaPredicted RBP10.52□□□□□ -0.73
VPS29-208ENST00000550267 TMEM51Q9NW97 253 aa10.52□□□□□ -0.73
VPS29-208ENST00000550267 OCIAD1Q9NX40 245 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms