RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 SPATS1Q496A3 300 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 PRMT9Q6P2P2 845 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 PRSS55Q6UWB4 352 aaPredicted RBP8.95□□□□□ -0.98
TMEM116-209ENST00000550020 CHSY3Q70JA7 882 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 DENND1CQ8IV53 801 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 DSELQ8IZU8 1212 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 CRIPAKQ8N1N5 446 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 PELI3Q8N2H9 469 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 PCYOX1LQ8NBM8 494 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 HJURPQ8NCD3 748 aaPredicted RBP8.95□□□□□ -0.98
TMEM116-209ENST00000550020 FBXO27Q8NI29 283 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 MAPK15Q8TD08 544 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 SGF29Q96ES7 293 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 CDKN2AIPNLQ96HQ2 116 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 DNAJC1Q96KC8 554 aaKnown RBP8.95□□□□□ -0.98
TMEM116-209ENST00000550020 B3GALT6Q96L58 329 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 TBATAQ96M53 351 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 ZNF558Q96NG5 402 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 TRIB3Q96RU7 358 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 OLFM1Q99784 485 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 AARSD1Q9BTE6 412 aaKnown RBP8.95□□□□□ -0.98
TMEM116-209ENST00000550020 TDRD1Q9BXT4 1180 aaKnown RBP8.95□□□□□ -0.98
TMEM116-209ENST00000550020 DERL2Q9GZP9 239 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 MUC3BQ9H195 1237 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 HIPK3Q9H422 1215 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 WDR41Q9HAD4 459 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 CYP4F11Q9HBI6 524 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 TMEM45AQ9NWC5 275 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 STOML2Q9UJZ1 356 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 LSM7Q9UK45 103 aaKnown RBP8.95□□□□□ -0.98
TMEM116-209ENST00000550020 ZNF510Q9Y2H8 683 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 TRAF6Q9Y4K3 522 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 FNDC1Q4ZHG4 1894 aaPredicted RBP8.95□□□□□ -0.98
TMEM116-209ENST00000550020 MYO16Q9Y6X6 1858 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.94□□□□□ -0.98
TMEM116-209ENST00000550020 LCHNA4D1U4 455 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 STX16-NPEPL1H3BU86 382 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 PSMD12O00232 456 aaPredicted RBP8.94□□□□□ -0.98
TMEM116-209ENST00000550020 CBX4O00257 560 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 SDHDO14521 159 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 STX16O14662 325 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 PRRG1O14668 218 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 STX7O15400 261 aaKnown RBP8.94□□□□□ -0.98
TMEM116-209ENST00000550020 KERAO60938 352 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 EFCAB14O75071 495 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 CRCPO75575 148 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 STC2O76061 302 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 ABLIM3O94929 683 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 WISP3O95389 354 aaPredicted RBP8.94□□□□□ -0.98
TMEM116-209ENST00000550020 VNN2O95498 520 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 MLYCDO95822 493 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 EFEMP2O95967 443 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 SOD2P04179 222 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 URODP06132 367 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 GFAPP14136 432 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 CD1DP15813 335 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 ZNF37AP17032 561 aaPredicted RBP8.94□□□□□ -0.98
TMEM116-209ENST00000550020 LAG3P18627 525 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 SP100P23497 879 aaPredicted RBP8.94□□□□□ -0.98
TMEM116-209ENST00000550020 SLC6A4P31645 630 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 GMPRP36959 345 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 HSPA13P48723 471 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 SCNN1BP51168 640 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 ARSDP51689 593 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 CLCN4P51793 760 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 ZNF140P52738 457 aaPredicted RBP8.94□□□□□ -0.98
TMEM116-209ENST00000550020 CDKN2DP55273 166 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 FLOT2Q14254 428 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 FASTKQ14296 549 aaKnown RBP8.94□□□□□ -0.98
TMEM116-209ENST00000550020 GALNT3Q14435 633 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 MAP7D1Q3KQU3 841 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 ZNF678Q5SXM1 525 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 RARS2Q5T160 578 aaKnown RBP8.94□□□□□ -0.98
TMEM116-209ENST00000550020 SPOUT1Q5T280 376 aaKnown RBP8.94□□□□□ -0.98
TMEM116-209ENST00000550020 GPR158Q5T848 1215 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 LYPLAL1Q5VWZ2 237 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 RNF219Q5W0B1 726 aaPredicted RBP8.94□□□□□ -0.98
TMEM116-209ENST00000550020 RETSATQ6NUM9 610 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 CNKSR3Q6P9H4 555 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 HACD2Q6Y1H2 254 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 CERS6Q6ZMG9 384 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 ISCA2Q86U28 154 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 CIR1Q86X95 450 aaPredicted RBP8.94□□□□□ -0.98
TMEM116-209ENST00000550020 CFAP52Q8N1V2 620 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 MICAL1Q8TDZ2 1067 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 PPP2R3CQ969Q6 453 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 KIAA1191Q96A73 305 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 ROPN1LQ96C74 230 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 TMEM169Q96HH4 297 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 IGSF21Q96ID5 467 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 CLPTM1LQ96KA5 538 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 CATSPER2Q96P56 530 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 CYP2S1Q96SQ9 504 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 ECSITQ9BQ95 431 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 EFHD1Q9BUP0 239 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 HERC2P3Q9BVR0 1158 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 KLF16Q9BXK1 252 aaPredicted RBP8.94□□□□□ -0.98
TMEM116-209ENST00000550020 NUSAP1Q9BXS6 441 aaKnown RBP8.94□□□□□ -0.98
TMEM116-209ENST00000550020 OSBPL1AQ9BXW6 950 aa8.94□□□□□ -0.98
TMEM116-209ENST00000550020 KLHL4Q9C0H6 718 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms