RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 ARHGEF17Q96PE2 2063 aaPredicted RBP13.44□□□□□ -0.26
GCN1-206ENST00000549815 NPIPB15A6NHN6 443 aaPredicted RBP13.44□□□□□ -0.26
GCN1-206ENST00000549815 CDRT15L2A8MXV6 281 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 PSMD11O00231 422 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 NOBOXO60393 691 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 PROSCO94903 275 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 FUCA1P04066 466 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 PDHA1P08559 390 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 CYP2A6P11509 494 aaPredicted RBP13.44□□□□□ -0.26
GCN1-206ENST00000549815 MYCLP1P12525 358 aaPredicted RBP13.44□□□□□ -0.26
GCN1-206ENST00000549815 KELP23276 732 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 TEAD1P28347 426 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 ETV3P41162 512 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 GARSP41250 739 aaKnown RBP13.44□□□□□ -0.26
GCN1-206ENST00000549815 TAS2R40P59535 323 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 GALNT2Q10471 571 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 SPIDRQ14159 915 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 KRT81Q14533 505 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 ALG1LQ6GMV1 187 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 HSD11B1LQ7Z5J1 315 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 TECPR1Q7Z6L1 1165 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 TSPAN33Q86UF1 283 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 LRRC49Q8IUZ0 686 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 BBS5Q8N3I7 341 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 PAF1Q8N7H5 531 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 FAF2Q96CS3 445 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 DTD2Q96FN9 168 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 FCRL3Q96P31 734 aaPredicted RBP13.44□□□□□ -0.26
GCN1-206ENST00000549815 UBL7Q96S82 380 aaPredicted RBP13.44□□□□□ -0.26
GCN1-206ENST00000549815 LGMNQ99538 433 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 PACSIN1Q9BY11 444 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 XPO4Q9C0E2 1151 aaKnown RBP13.44□□□□□ -0.26
GCN1-206ENST00000549815 TMEM168Q9H0V1 697 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 KCTD5Q9NXV2 234 aa13.44□□□□□ -0.26
GCN1-206ENST00000549815 ATMQ13315 3056 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 PRSS38A1L453 326 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 CEACAM5P06731 702 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 CCL7P80098 99 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 HLTFQ14527 1009 aaKnown RBP eCLIP13.43□□□□□ -0.26
GCN1-206ENST00000549815 HADHQ16836 314 aaKnown RBP13.43□□□□□ -0.26
GCN1-206ENST00000549815 ZSCAN23Q3MJ62 389 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 ANKRD20A8PQ5CZ79 823 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 ARMC12Q5T9G4 340 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 TAF8Q7Z7C8 310 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 B3GNT8Q7Z7M8 397 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 CLEC14AQ86T13 490 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 HEATR4Q86WZ0 1026 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 C17orf82Q86X59 251 aaPredicted RBP13.43□□□□□ -0.26
GCN1-206ENST00000549815 NRROSQ86YC3 692 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 PQLC3Q8N755 202 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 OR6C4Q8NGE1 309 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 WDR36Q8NI36 951 aaKnown RBP13.43□□□□□ -0.26
GCN1-206ENST00000549815 GPBAR1Q8TDU6 330 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 NSMCE1Q8WV22 266 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 PTCD2Q8WV60 388 aaKnown RBP13.43□□□□□ -0.26
GCN1-206ENST00000549815 FATE1Q969F0 183 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 LIN37Q96GY3 246 aaPredicted RBP13.43□□□□□ -0.26
GCN1-206ENST00000549815 NAF1Q96HR8 494 aaKnown RBP13.43□□□□□ -0.26
GCN1-206ENST00000549815 SMIM14Q96QK8 99 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 SEMA3CQ99985 751 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 ZNF670Q9BS34 389 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 FRMD8Q9BZ67 464 aaPredicted RBP13.43□□□□□ -0.26
GCN1-206ENST00000549815 LRRN3Q9H3W5 708 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 CYP4F12Q9HCS2 524 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 NT5MQ9NPB1 228 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 THSD1Q9NS62 852 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 UVRAGQ9P2Y5 699 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 APPL1Q9UKG1 709 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 SCN8AQ9UQD0 1980 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 KALRNO60229 2985 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 UNC13CQ8NB66 2214 aa13.43□□□□□ -0.26
GCN1-206ENST00000549815 CCDC187A0A096LP49 1063 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 A0A0U1RQS6 177 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 D6RAR5 112 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 PDE2AO00408 941 aaPredicted RBP13.42□□□□□ -0.26
GCN1-206ENST00000549815 MATN3O15232 486 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 MAP3K6O95382 1288 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 SOD1P00441 154 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 RPLP0P05388 317 aaKnown RBP13.42□□□□□ -0.26
GCN1-206ENST00000549815 H2AFZP0C0S5 128 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 PNLIPP16233 465 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 GLB1P16278 677 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 CTPS1P17812 591 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 CDK3Q00526 305 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 PTSQ03393 145 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 DPTQ07507 201 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 PDK2Q15119 407 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 SLC18A3Q16572 532 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 CERCAMQ5T4B2 595 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 DENND2CQ68D51 928 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 RFLNAQ6ZTI6 216 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 Q6ZVL8 140 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 H2AFVQ71UI9 128 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 GPR155Q7Z3F1 870 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 FAM46DQ8NEK8 389 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 ARRDC2Q8TBH0 407 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 KCNE4Q8WWG9 221 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 TSGA13Q96PP4 275 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 DNAJC7Q99615 494 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 DPH1Q9BZG8 443 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms