RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 ZNF607Q96SK3 696 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 B3GNT5Q9BYG0 378 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 KLHL4Q9C0H6 718 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 IGKV6D-21A0A0A0MT36 114 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 AZIN1O14977 448 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 PIGNO95427 931 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 SNAI1O95863 264 aaPredicted RBP9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 PIM1P11309 404 aaPredicted RBP9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 ZNF24P17028 368 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 SMAD1Q15797 465 aaKnown RBP9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 C16orf87Q6PH81 154 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 MARK2Q7KZI7 788 aaKnown RBP9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 SAPCD2Q86UD0 394 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 GPR135Q8IZ08 494 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 ATAD1Q8NBU5 361 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 IRF7Q92985 503 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 Q96MT0 163 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 HOPXQ9BPY8 73 aaPredicted RBP9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 ACE2Q9BYF1 805 aaPredicted RBP9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 SFMBT1Q9UHJ3 866 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 LGALS13Q9UHV8 139 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 ZNF780BQ9Y6R6 833 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 MORN1Q5T089 497 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 TSTD2Q5T7W7 516 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 TTC33Q6PID6 262 aaPredicted RBP9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 PTCD3Q96EY7 689 aaKnown RBP9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 PPP1R36Q96LQ0 422 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 MIOSQ9NXC5 875 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 ABI3Q9P2A4 366 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 TPRKBQ9Y3C4 175 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 PCDHB9Q9Y5E1 797 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 ZFP37Q9Y6Q3 630 aaPredicted RBP9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 SOBPA7XYQ1 873 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 MAN2B1O00754 1011 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 FCHO1O14526 889 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 ENO2P09104 434 aaPredicted RBP9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 PRKG2Q13237 762 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 SOWAHAQ2M3V2 549 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 AP1ARQ63HQ0 302 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 PMF1Q6P1K2 205 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 C17orf99Q6UX52 265 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 CASP12Q6UXS9 341 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 RD3Q7Z3Z2 195 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 C11orf74Q86VG3 221 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 CCDC33Q8N5R6 958 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 B4GALNT2Q8NHY0 566 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 ZNF461Q8TAF7 563 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 HSFX1Q9UBD0 423 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 SLC9A8Q9Y2E8 581 aa9.25□□□□□ -0.93
PPFIA2-216ENST00000549396 TBC1D3DA0A087WVF3 549 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 TBC1D3IA0A087WXS9 549 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 TBC1D3EA0A087X179 549 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 TBC1D3KA0A087X1G2 549 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 TBC1D3FA6NER0 549 aaPredicted RBP9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 TBC1D3LB9A6J9 549 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 H7C0S8 307 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 CALCAP01258 141 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 VIPP01282 170 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 SNRPB2P08579 225 aaKnown RBP9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 TBC1D3HP0C7X1 549 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 TTKP33981 857 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 GYS2P54840 703 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 XIAPP98170 497 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 DPY19L1Q2PZI1 675 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 TBC1D3GQ6DHY5 549 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 TBC1D3CQ6IPX1 549 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 NPNTQ6UXI9 565 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 TBC1D3Q8IZP1 549 aaPredicted RBP9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 LRRC57Q8N9N7 239 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 TEKT5Q96M29 485 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 TEFMQ96QE5 360 aaKnown RBP9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 CCM2Q9BSQ5 444 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 ZSCAN5AQ9BUG6 496 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 ZCWPW1Q9H0M4 648 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 POLR1BQ9H9Y6 1135 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 SMURF2Q9HAU4 748 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 MTRRQ9UBK8 725 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 PHF24Q9UPV7 400 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 PIRO00625 290 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 MAP2K7O14733 419 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 AP2A2O94973 939 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 CST3P01034 146 aaPredicted RBP9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 SERPINA6P08185 405 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 PSMC3P17980 439 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 ITGA1P56199 1179 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 STXBP1P61764 594 aaKnown RBP9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 SP2Q02086 613 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 MTX3Q5HYI7 312 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 UBE2R2Q712K3 238 aaPredicted RBP9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 SNX20Q7Z614 316 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 SLC41A1Q8IVJ1 513 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 HERVK_113Q902F9 699 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 PHF21BQ96EK2 531 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 LINGO1Q96FE5 620 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 SH3GL3Q99963 347 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 ALG9Q9H6U8 611 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 ERVK-5Q9HDB9 667 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 ITM2CQ9NQX7 267 aa9.24□□□□□ -0.93
PPFIA2-216ENST00000549396 SLC2A4RGQ9NR83 387 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms