RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 DNAJB2P25686 324 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 TTKP33981 857 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 SOX11P35716 441 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 HCAR3P49019 387 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 GSTM4Q03013 218 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 PLCL1Q15111 1095 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 CYBRD1Q53TN4 286 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 AGAP9Q5VTM2 703 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 ZNF354CQ86Y25 554 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 ACDQ96AP0 544 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 CCDC126Q96EE4 140 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 FEM1CQ96JP0 617 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 SEZ6LQ9BYH1 1024 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 AKTIPQ9H8T0 292 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 OR12D3Q9UGF7 316 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 CORINQ9Y5Q5 1042 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 MRPL42Q9Y6G3 142 aaKnown RBP13.75□□□□□ -0.21
HDAC7-228ENST00000548938 RALGAPA2Q2PPJ7 1873 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 TRIM64BA6NI03 449 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 ASB14A6NK59 587 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 DFFAO00273 331 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 SUPT7LO94864 414 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 MT-ND1P03886 318 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 POLR2IP36954 125 aaKnown RBP13.75□□□□□ -0.21
HDAC7-228ENST00000548938 CAPGP40121 348 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 ATP4BP51164 291 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 BCAP31P51572 246 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 AIF1P55008 147 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 TRAF2Q12933 501 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 NFATC3Q12968 1075 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 TTLL4Q14679 1199 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 ZNF792Q3KQV3 632 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 SPRYD7Q5W111 196 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 GRAMD4Q6IC98 578 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 SLC27A1Q6PCB7 646 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 GPRIN1Q7Z2K8 1008 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 ZC3H7AQ8IWR0 971 aaKnown RBP13.75□□□□□ -0.21
HDAC7-228ENST00000548938 DDIASQ8IXT1 998 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 DHRSXQ8N5I4 330 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 C2orf69Q8N8R5 385 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 PTPN18Q99952 460 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 MED10Q9BTT4 135 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 TREX1Q9NSU2 369 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 GDAP2Q9NXN4 497 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.75□□□□□ -0.21
HDAC7-228ENST00000548938 DSEQ9UL01 958 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 UBQLN1Q9UMX0 589 aaKnown RBP13.75□□□□□ -0.21
HDAC7-228ENST00000548938 AAR2Q9Y312 384 aaKnown RBP13.75□□□□□ -0.21
HDAC7-228ENST00000548938 BBIP1A8MTZ0 92 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 INPP4BO15327 924 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 CACNG3O60359 315 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 ADAM23O75077 832 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 PMPCBO75439 489 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 SNAP29O95721 258 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 HSD17B1P14061 328 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 KCNC1P48547 511 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 CDH13P55290 713 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 SOX4Q06945 474 aaPredicted RBP13.74□□□□□ -0.21
HDAC7-228ENST00000548938 CYP51A1Q16850 503 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 UGT3A2Q3SY77 523 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 NOMO2Q5JPE7 1267 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 TMTC4Q5T4D3 741 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 NEPROQ6NW34 567 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 KLHDC8BQ8IXV7 354 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 SLC15A4Q8N697 577 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 MAGEE2Q8TD90 523 aaPredicted RBP13.74□□□□□ -0.21
HDAC7-228ENST00000548938 EDEM1Q92611 657 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 COLEC11Q9BWP8 271 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 TKTL2Q9H0I9 626 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 ALG9Q9H6U8 611 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 CD320Q9NPF0 282 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 SMPD3Q9NY59 655 aaPredicted RBP13.74□□□□□ -0.21
HDAC7-228ENST00000548938 ACTR3BQ9P1U1 418 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 ANGPT2O15123 496 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 B4GAT1O43505 415 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 CLASP2O75122 1294 aaKnown RBP13.74□□□□□ -0.21
HDAC7-228ENST00000548938 GFAPP14136 432 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 MATN1P21941 496 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 SLC6A2P23975 617 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 DAOAP59103 153 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 RAB15P59190 212 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 GNA12Q03113 381 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 BNIP2Q12982 314 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 FAM117BQ6P1L5 589 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 ALKAL1Q6UXT8 129 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 CATSPER4Q7RTX7 472 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 IFNEQ86WN2 208 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 TERB1Q8NA31 727 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 TRPV3Q8NET8 790 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 KCTD13Q8WZ19 329 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 ZNF560Q96MR9 790 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 HOPXQ9BPY8 73 aaPredicted RBP13.74□□□□□ -0.21
HDAC7-228ENST00000548938 NEURL2Q9BR09 285 aa13.74□□□□□ -0.21
HDAC7-228ENST00000548938 MTG1Q9BT17 334 aaPredicted RBP13.74□□□□□ -0.21
HDAC7-228ENST00000548938 MRM3Q9HC36 420 aaKnown RBP13.74□□□□□ -0.21
HDAC7-228ENST00000548938 TRNAU1APQ9NX07 287 aaKnown RBP13.74□□□□□ -0.21
HDAC7-228ENST00000548938 SMIM28A0A1B0GU29 152 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 TTC24A2A3L6 582 aaPredicted RBP13.73□□□□□ -0.21
HDAC7-228ENST00000548938 PPP6CO00743 305 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 PSMD3O43242 534 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms