RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 PCDHB5Q9Y5E4 795 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 CDC7O00311 574 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 INPP4BO15327 924 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 SNRPB2P08579 225 aaKnown RBP13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 SPATA31D3P0C874 917 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 EEF1DP29692 281 aaKnown RBP13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 APLP1P51693 650 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 CDK18Q07002 472 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 ZNF423Q2M1K9 1284 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 BRMS1LQ5PSV4 323 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 FAM91A1Q658Y4 838 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 SPATA31D4Q6ZUB0 917 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 HERC6Q8IVU3 1022 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 DCP1BQ8IZD4 617 aaKnown RBP13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 PGAM4Q8N0Y7 254 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 PGBD5Q8N414 524 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 LZTR1Q8N653 840 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 CDYL2Q8N8U2 506 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 CYGBQ8WWM9 190 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 CNDP1Q96KN2 507 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 TMEM79Q9BSE2 394 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 CRISPLD1Q9H336 500 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 Q9H521 79 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 SOX17Q9H6I2 414 aaPredicted RBP13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 AKTIPQ9H8T0 292 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 UBAP1Q9NZ09 502 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 CD274Q9NZQ7 290 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 VTI1BQ9UEU0 232 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 NPEPPSL1A6NEC2 478 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 PCNAP12004 261 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 PRDX3P30048 256 aaKnown RBP13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 SH3BP2P78314 561 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 PPP1R8Q12972 351 aaKnown RBP13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 METTL21CQ5VZV1 264 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 GLT6D1Q7Z4J2 308 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 DEFB128Q7Z7B8 93 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 ATP6V0D2Q8N8Y2 350 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 GABPB2Q8TAK5 448 aaPredicted RBP13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 CANT1Q8WVQ1 401 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 ERLEC1Q96DZ1 483 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 C19orf60Q96EN9 201 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 MPP4Q96JB8 637 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 HAPLN3Q96S86 360 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 CROTQ9UKG9 612 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 A0A0J9YYE9 177 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 NIPSNAP2O75323 286 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 H2AFYO75367 372 aaKnown RBP13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 SERPINF2P08697 491 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 RBP1P09455 135 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 YBX1P67809 324 aaKnown RBP13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 STX5Q13190 355 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 SEMA3AQ14563 771 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 TECRLQ5HYJ1 363 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 OTUD3Q5T2D3 398 aaPredicted RBP13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 ZBTB49Q6ZSB9 765 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 TMCO2Q7Z6W1 182 aaPredicted RBP13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 TSPAN17Q96FV3 270 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 GPR21Q99679 349 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 CINPQ9BW66 212 aaPredicted RBP13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 CSNK1G1Q9HCP0 422 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 EVLQ9UI08 416 aaPredicted RBP13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 CROCCQ5TZA2 2017 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 F5H5T6 163 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 BMP1P13497 986 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 PIGGQ5H8A4 983 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 KIAA0930Q6ICG6 404 aaPredicted RBP13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 MRNIPQ6NTE8 343 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 IFNL1Q8IU54 200 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 POLR1EQ9GZS1 481 aaKnown RBP13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 ATP13A1Q9HD20 1204 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 GALPQ9UBC7 116 aa13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 KIAA0100Q14667 2235 aaKnown RBP13.67□□□□□ -0.22
PRPF40B-209ENST00000548825 PLXNA1Q9UIW2 1896 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 A0A087X1B8 175 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 ARHGEF37A1IGU5 675 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 SNX2O60749 519 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 RGRP47804 291 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 IRX1P78414 480 aaPredicted RBP13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 HNRNPDQ14103 355 aaKnown RBP13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 OR4D1Q15615 310 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 SLC5A9Q2M3M2 681 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 C18orf21Q32NC0 220 aaPredicted RBP13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 C6orf10Q5SRN2 563 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 RNF19BQ6ZMZ0 732 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 BNIPLQ7Z465 357 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 PGAP3Q96FM1 320 aaPredicted RBP13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 NR1H4Q96RI1 486 aaPredicted RBP13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 UPF3AQ9H1J1 476 aaKnown RBP13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 CATSPERZQ9NTU4 200 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 CACNA2D2Q9NY47 1150 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 HEMK1Q9Y5R4 338 aaPredicted RBP13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 RANBP2P49792 3224 aaKnown RBP13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 AP3B1O00203 1094 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 FFAR3O14843 346 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 GPR42O15529 346 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 NRP2O60462 931 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 GKP32189 559 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 MAGEA12P43365 314 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 NRG1Q02297 640 aaPredicted RBP13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 RBBP5Q15291 538 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms