RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 ITGB6P18564 788 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 HSPA9P38646 679 aaKnown RBP9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 ETV5P41161 510 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 GNPDA1P46926 289 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 SCNN1BP51168 640 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 ZNF135P52742 658 aaPredicted RBP9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 COPB1P53618 953 aaKnown RBP9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 LIMK2P53671 638 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 POLE2P56282 527 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 OR1D5P58170 312 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 CYP4F2P78329 520 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 B4GALNT1Q00973 533 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 C1QBPQ07021 282 aaKnown RBP9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 SRSF6Q13247 344 aaKnown RBP9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 ZNF235Q14590 738 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 CLEC16AQ2KHT3 1053 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 ARTNQ5T4W7 220 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 FAM129CQ86XR2 697 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 PHF13Q86YI8 300 aaPredicted RBP9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 NRSN1Q8IZ57 195 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 CACNA2D3Q8IZS8 1091 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 PYROXD2Q8N2H3 581 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 LZTR1Q8N653 840 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 PLA2G15Q8NCC3 412 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 OR10G6Q8NH81 332 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 PDCD6IPQ8WUM4 868 aaKnown RBP9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 JPH3Q8WXH2 748 aaPredicted RBP9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 CCDC74BQ96LY2 380 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 MCEEQ96PE7 176 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 SLC38A3Q99624 504 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 ZPBPQ9BS86 351 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 ANP32EQ9BTT0 268 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 TRIT1Q9H3H1 467 aaKnown RBP9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 NOL6Q9H6R4 1146 aaKnown RBP9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 NLRC4Q9NPP4 1024 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 FAM207AQ9NSI2 230 aaPredicted RBP9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 KCNK4Q9NYG8 393 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 TAAR2Q9P1P5 351 aa9.13□□□□□ -0.95
AC055716.3-201ENST00000547533 IGHV5-10-1A0A0J9YXX1 117 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 B4E171 279 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 J3KR12 359 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 PSMD11O00231 422 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 DUX1O43812 170 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 BUB1BO60566 1050 aaPredicted RBP9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 ECEL1O95672 775 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 CPP00450 1065 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 PRKCGP05129 697 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 SLC2A4P14672 509 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 MAP4P27816 1152 aaKnown RBP9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 TSPAN7P41732 249 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 PAPOLAP51003 745 aaKnown RBP9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 MAZP56270 477 aaKnown RBP9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 IL10RBQ08334 325 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 UBAP2LQ14157 1087 aaKnown RBP9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 NR1D2Q14995 579 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 C16orf72Q14CZ0 275 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 RAB6CQ53S08 254 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 PPP1R15BQ5SWA1 713 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 AFMIDQ63HM1 303 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 DENND2CQ68D51 928 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 RAET1GQ6H3X3 334 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 SLC30A9Q6PML9 568 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 CEACAM20Q6UY09 585 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 USP45Q70EL2 814 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 KDELC2Q7Z4H8 507 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 ZNF438Q7Z4V0 828 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 ATCAYQ86WG3 371 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 HEATR4Q86WZ0 1026 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 NLGN4XQ8N0W4 816 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 NETO2Q8NC67 525 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 TSEN2Q8NCE0 465 aaKnown RBP9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 RCBTB1Q8NDN9 531 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 NLGN4YQ8NFZ3 816 aaPredicted RBP9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 NEK11Q8NG66 645 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 C9orf43Q8TAL5 461 aaPredicted RBP9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 ART4Q93070 314 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 NKD1Q969G9 470 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 SH3KBP1Q96B97 665 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 ECHDC3Q96DC8 303 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 CELF6Q96J87 481 aaKnown RBP9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 ZNF599Q96NL3 588 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 FUCA2Q9BTY2 467 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 SLC12A9Q9BXP2 914 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 KLC2Q9H0B6 622 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 RAB6CQ9H0N0 254 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 VPS16Q9H269 839 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 DHX35Q9H5Z1 703 aaKnown RBP9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 LRRC19Q9H756 370 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 ZWILCHQ9H900 591 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 GPN2Q9H9Y4 310 aaPredicted RBP9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 PDFQ9HBH1 243 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 AP4E1Q9UPM8 1137 aa9.12□□□□□ -0.95
AC055716.3-201ENST00000547533 FLNCQ14315 2725 aa9.11□□□□□ -0.95
AC055716.3-201ENST00000547533 EFCAB7A8K855 629 aa9.11□□□□□ -0.95
AC055716.3-201ENST00000547533 A8MX80 341 aa9.11□□□□□ -0.95
AC055716.3-201ENST00000547533 B4GAT1O43505 415 aa9.11□□□□□ -0.95
AC055716.3-201ENST00000547533 PRPSAP2O60256 369 aa9.11□□□□□ -0.95
AC055716.3-201ENST00000547533 RAD1O60671 282 aa9.11□□□□□ -0.95
AC055716.3-201ENST00000547533 SOCS5O75159 536 aa9.11□□□□□ -0.95
AC055716.3-201ENST00000547533 FGF1P05230 155 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms