RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 CDRT15L2A8MXV6 281 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 MFSD11O43934 449 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 NOBOXO60393 691 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 MAP3K6O95382 1288 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 PRB1P04280 392 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 RPLP0P05388 317 aaKnown RBP13.35□□□□□ -0.27
CPSF6-204ENST00000547486 CEACAM5P06731 702 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 RBMS1P29558 406 aaKnown RBP13.35□□□□□ -0.27
CPSF6-204ENST00000547486 SSR1P43307 286 aaKnown RBP13.35□□□□□ -0.27
CPSF6-204ENST00000547486 TAS2R40P59535 323 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 SKOR1P84550 965 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 DPYSL3Q14195 570 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 NCBP2-AS2Q69YL0 99 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 PCSK4Q6UW60 755 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 Q6ZVL8 140 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 GPR155Q7Z3F1 870 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 Q8N9G6 341 aaPredicted RBP13.35□□□□□ -0.27
CPSF6-204ENST00000547486 WDR36Q8NI36 951 aaKnown RBP13.35□□□□□ -0.27
CPSF6-204ENST00000547486 WDR48Q8TAF3 677 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 NUS1Q96E22 293 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 DTD2Q96FN9 168 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 SEMA3CQ99985 751 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 PACSIN1Q9BY11 444 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 TEX101Q9BY14 249 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 FOXP3Q9BZS1 431 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 LRRN3Q9H3W5 708 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 WDR26Q9H7D7 661 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 CPNE5Q9HCH3 593 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 THSD1Q9NS62 852 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 SPATS2LQ9NUQ6 558 aaKnown RBP13.35□□□□□ -0.27
CPSF6-204ENST00000547486 RCOR3Q9P2K3 495 aaPredicted RBP13.35□□□□□ -0.27
CPSF6-204ENST00000547486 MOSPD1Q9UJG1 213 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 SSUH2Q9Y2M2 353 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 PPIL1Q9Y3C6 166 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 ST14Q9Y5Y6 855 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 RNF215Q9Y6U7 377 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 RP1P56715 2156 aa13.35□□□□□ -0.27
CPSF6-204ENST00000547486 PRSS38A1L453 326 aa13.34□□□□□ -0.27
CPSF6-204ENST00000547486 GOLGA6L19H0YKK7 550 aa13.34□□□□□ -0.27
CPSF6-204ENST00000547486 KLK10O43240 276 aa13.34□□□□□ -0.27
CPSF6-204ENST00000547486 FZD6O60353 706 aa13.34□□□□□ -0.27
CPSF6-204ENST00000547486 TNFSF15O95150 251 aa13.34□□□□□ -0.27
CPSF6-204ENST00000547486 MYCLP1P12525 358 aaPredicted RBP13.34□□□□□ -0.27
CPSF6-204ENST00000547486 KELP23276 732 aa13.34□□□□□ -0.27
CPSF6-204ENST00000547486 HNRNPH3P31942 346 aaKnown RBP13.34□□□□□ -0.27
CPSF6-204ENST00000547486 SERPINB6P35237 376 aa13.34□□□□□ -0.27
CPSF6-204ENST00000547486 GARSP41250 739 aaKnown RBP13.34□□□□□ -0.27
CPSF6-204ENST00000547486 POLD2P49005 469 aa13.34□□□□□ -0.27
CPSF6-204ENST00000547486 GALNT2Q10471 571 aa13.34□□□□□ -0.27
CPSF6-204ENST00000547486 HLTFQ14527 1009 aaKnown RBP eCLIP13.34□□□□□ -0.27
CPSF6-204ENST00000547486 PAFAH1B3Q15102 231 aaKnown RBP13.34□□□□□ -0.27
CPSF6-204ENST00000547486 ANKRD20A8PQ5CZ79 823 aa13.34□□□□□ -0.27
CPSF6-204ENST00000547486 ARMC12Q5T9G4 340 aa13.34□□□□□ -0.27
CPSF6-204ENST00000547486 TECPR1Q7Z6L1 1165 aa13.34□□□□□ -0.27
CPSF6-204ENST00000547486 HEATR4Q86WZ0 1026 aa13.34□□□□□ -0.27
CPSF6-204ENST00000547486 NRROSQ86YC3 692 aa13.34□□□□□ -0.27
CPSF6-204ENST00000547486 BBS5Q8N3I7 341 aa13.34□□□□□ -0.27
CPSF6-204ENST00000547486 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.34□□□□□ -0.27
CPSF6-204ENST00000547486 ZNF564Q8TBZ8 553 aaPredicted RBP13.34□□□□□ -0.27
CPSF6-204ENST00000547486 NSMCE1Q8WV22 266 aa13.34□□□□□ -0.27
CPSF6-204ENST00000547486 KCNE4Q8WWG9 221 aa13.34□□□□□ -0.27
CPSF6-204ENST00000547486 MAML1Q92585 1016 aa13.34□□□□□ -0.27
CPSF6-204ENST00000547486 GFM1Q96RP9 751 aaKnown RBP13.34□□□□□ -0.27
CPSF6-204ENST00000547486 MCCC1Q96RQ3 725 aaPredicted RBP13.34□□□□□ -0.27
CPSF6-204ENST00000547486 XPO4Q9C0E2 1151 aaKnown RBP13.34□□□□□ -0.27
CPSF6-204ENST00000547486 DPEP2Q9H4A9 486 aa13.34□□□□□ -0.27
CPSF6-204ENST00000547486 SUDS3Q9H7L9 328 aaPredicted RBP13.34□□□□□ -0.27
CPSF6-204ENST00000547486 CARS2Q9HA77 564 aaKnown RBP13.34□□□□□ -0.27
CPSF6-204ENST00000547486 APPL1Q9UKG1 709 aa13.34□□□□□ -0.27
CPSF6-204ENST00000547486 ATXN7L1Q9ULK2 861 aaPredicted RBP13.34□□□□□ -0.27
CPSF6-204ENST00000547486 MGAQ8IWI9 3026 aa13.34□□□□□ -0.27
CPSF6-204ENST00000547486 CCDC187A0A096LP49 1063 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 B4DGG1 531 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 D6RAR5 112 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 PDE2AO00408 941 aaPredicted RBP13.33□□□□□ -0.28
CPSF6-204ENST00000547486 ATXN7O15265 892 aaPredicted RBP13.33□□□□□ -0.28
CPSF6-204ENST00000547486 PROSCO94903 275 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 FGF1P05230 155 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 CYP2A6P11509 494 aaPredicted RBP13.33□□□□□ -0.28
CPSF6-204ENST00000547486 GLB1P16278 677 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 GJC1P36383 396 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 CDK3Q00526 305 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 DSC2Q02487 901 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 PTSQ03393 145 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 GBE1Q04446 702 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 ITKQ08881 620 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 SLC10A2Q12908 348 aaPredicted RBP13.33□□□□□ -0.28
CPSF6-204ENST00000547486 HADHQ16836 314 aaKnown RBP13.33□□□□□ -0.28
CPSF6-204ENST00000547486 ASTE1Q2TB18 679 aaPredicted RBP13.33□□□□□ -0.28
CPSF6-204ENST00000547486 ZSCAN23Q3MJ62 389 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 C14orf28Q4W4Y0 310 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 RALGPS1Q5JS13 557 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 FAM182AQ5T1J6 154 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 CERCAMQ5T4B2 595 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 SPECC1LQ69YQ0 1117 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 TMPRSS9Q7Z410 1059 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 LRRC49Q8IUZ0 686 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 PQLC3Q8N755 202 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 KCTD6Q8NC69 237 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 OR6C4Q8NGE1 309 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms