RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 MCM9Q9NXL9 1143 aa4.08□□□□□ -1.76
CCDC38-204ENST00000546816 RCOR1Q9UKL0 485 aa4.08□□□□□ -1.76
CCDC38-204ENST00000546816 GPR52Q9Y2T5 361 aa4.08□□□□□ -1.76
CCDC38-204ENST00000546816 A0A1W2PS18 150 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 ASPDHA6ND91 283 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 IFNL4K9M1U5 179 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 FGF17O60258 216 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 AMBPP02760 352 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 ATP1A1P05023 1023 aaKnown RBP4.07□□□□□ -1.76
CCDC38-204ENST00000546816 GALTP07902 379 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 CYC1P08574 325 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 G6PDP11413 515 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 SHMT1P34896 483 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 TIMP3P35625 211 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 DDIT3P35638 169 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 GPD2P43304 727 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 SEC61BP60468 96 aaKnown RBP4.07□□□□□ -1.76
CCDC38-204ENST00000546816 TDGQ13569 410 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 VEPH1Q14D04 833 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 C2orf68Q2NKX9 166 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 EIF2S3LQ2VIR3 472 aaKnown RBP4.07□□□□□ -1.76
CCDC38-204ENST00000546816 ZNF766Q5HY98 468 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 FBXO46Q6PJ61 603 aaPredicted RBP4.07□□□□□ -1.76
CCDC38-204ENST00000546816 C19orf48Q6RUI8 117 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 LDHAL6AQ6ZMR3 332 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 TAOK1Q7L7X3 1001 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 WDR63Q8IWG1 891 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 DHX40Q8IX18 779 aaKnown RBP4.07□□□□□ -1.76
CCDC38-204ENST00000546816 BEST2Q8NFU1 509 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 OR13A1Q8NGR1 328 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 HERVK_113Q902F9 699 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 LBHD1Q9BQE6 289 aaPredicted RBP4.07□□□□□ -1.76
CCDC38-204ENST00000546816 HSPB7Q9UBY9 170 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 RALYQ9UKM9 306 aaKnown RBP4.07□□□□□ -1.76
CCDC38-204ENST00000546816 LSM4Q9Y4Z0 139 aaKnown RBP4.07□□□□□ -1.76
CCDC38-204ENST00000546816 TAF1P21675 1872 aa4.07□□□□□ -1.76
CCDC38-204ENST00000546816 BCAT2O15382 392 aaPredicted RBP4.06□□□□□ -1.76
CCDC38-204ENST00000546816 PIP5K1CO60331 668 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 TACC1O75410 805 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 SLC22A3O75751 556 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 ZNF883P0CG24 379 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 CETPP11597 493 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 S1PR1P21453 382 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 CDKN1AP38936 164 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 CDH15P55291 814 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 BIRC2Q13490 618 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 KCNT1Q5JUK3 1230 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 PLA2G4FQ68DD2 849 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 TXNDC8Q6A555 127 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 TMEM81Q6P7N7 255 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 CPLX2Q6PUV4 134 aaKnown RBP4.06□□□□□ -1.76
CCDC38-204ENST00000546816 KRBA2Q6ZNG9 492 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 LINGO2Q7L985 606 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 ZNF34Q8IZ26 560 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 ZCCHC9Q8N567 271 aaKnown RBP4.06□□□□□ -1.76
CCDC38-204ENST00000546816 KCNH5Q8NCM2 988 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 C11orf65Q8NCR3 313 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 MAGEC3Q8TD91 643 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 DUSP19Q8WTR2 217 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 ABTB1Q969K4 478 aaPredicted RBP4.06□□□□□ -1.76
CCDC38-204ENST00000546816 ZNF696Q9H7X3 374 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 ZNF334Q9HCZ1 680 aaPredicted RBP4.06□□□□□ -1.76
CCDC38-204ENST00000546816 MMP25Q9NPA2 562 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 RIC8AQ9NPQ8 531 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 HSF4Q9ULV5 492 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 TCF19Q9Y242 345 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 COMMD10Q9Y6G5 202 aa4.06□□□□□ -1.76
CCDC38-204ENST00000546816 TP53BP1Q12888 1972 aaPredicted RBP4.05□□□□□ -1.76
CCDC38-204ENST00000546816 TMEM202A6NGA9 273 aa4.05□□□□□ -1.76
CCDC38-204ENST00000546816 MT-CYBP00156 380 aaPredicted RBP4.05□□□□□ -1.76
CCDC38-204ENST00000546816 FGF5P12034 268 aa4.05□□□□□ -1.76
CCDC38-204ENST00000546816 CD53P19397 219 aa4.05□□□□□ -1.76
CCDC38-204ENST00000546816 MAOAP21397 527 aa4.05□□□□□ -1.76
CCDC38-204ENST00000546816 POU1F1P28069 291 aa4.05□□□□□ -1.76
CCDC38-204ENST00000546816 PGM1P36871 562 aa4.05□□□□□ -1.76
CCDC38-204ENST00000546816 TMPOP42166 694 aaKnown RBP4.05□□□□□ -1.76
CCDC38-204ENST00000546816 LINC01547P58512 204 aaPredicted RBP4.05□□□□□ -1.76
CCDC38-204ENST00000546816 UBE3AQ05086 875 aa4.05□□□□□ -1.76
CCDC38-204ENST00000546816 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.05□□□□□ -1.76
CCDC38-204ENST00000546816 CTF1Q16619 201 aa4.05□□□□□ -1.76
CCDC38-204ENST00000546816 NFIL3Q16649 462 aa4.05□□□□□ -1.76
CCDC38-204ENST00000546816 TCTN1Q2MV58 587 aa4.05□□□□□ -1.76
CCDC38-204ENST00000546816 SLC36A4Q6YBV0 504 aa4.05□□□□□ -1.76
CCDC38-204ENST00000546816 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.05□□□□□ -1.76
CCDC38-204ENST00000546816 DSELQ8IZU8 1212 aa4.05□□□□□ -1.76
CCDC38-204ENST00000546816 C1orf87Q8N0U7 546 aa4.05□□□□□ -1.76
CCDC38-204ENST00000546816 ZBTB2Q8N680 514 aa4.05□□□□□ -1.76
CCDC38-204ENST00000546816 BBS10Q8TAM1 723 aa4.05□□□□□ -1.76
CCDC38-204ENST00000546816 PPM1EQ8WY54 764 aa4.05□□□□□ -1.76
CCDC38-204ENST00000546816 BBS4Q96RK4 519 aa4.05□□□□□ -1.76
CCDC38-204ENST00000546816 GLIS2Q9BZE0 524 aaPredicted RBP4.05□□□□□ -1.76
CCDC38-204ENST00000546816 PLEKHA5Q9HAU0 1116 aa4.05□□□□□ -1.76
CCDC38-204ENST00000546816 C20orf141Q9NUB4 165 aa4.05□□□□□ -1.76
CCDC38-204ENST00000546816 BEX4Q9NWD9 120 aaPredicted RBP4.05□□□□□ -1.76
CCDC38-204ENST00000546816 TMEM160Q9NX00 188 aa4.05□□□□□ -1.76
CCDC38-204ENST00000546816 GREB1LQ9C091 1923 aaPredicted RBP4.05□□□□□ -1.76
CCDC38-204ENST00000546816 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 GAGE10A6NGK3 116 aa4.04□□□□□ -1.76
CCDC38-204ENST00000546816 AKR1B15C9JRZ8 316 aaPredicted RBP4.04□□□□□ -1.76
CCDC38-204ENST00000546816 FAM72CH0Y354 149 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms